Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.11□□□□□ -1.75
SSSCA1O60232 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.11□□□□□ -1.75
SSSCA1O60232 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.11□□□□□ -1.75
SSSCA1O60232 AC060775.1-201ENST00000518241 520 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.11□□□□□ -1.75
SSSCA1O60232 HMGB1P40-201ENST00000525121 540 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 EIF4A2P5-201ENST00000529914 499 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 AC079600.1-201ENST00000550326 297 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.11□□□□□ -1.75
SSSCA1O60232 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.11□□□□□ -1.75
SSSCA1O60232 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.11□□□□□ -1.75
SSSCA1O60232 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.11□□□□□ -1.75
SSSCA1O60232 AC116553.2-201ENST00000564203 463 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.11□□□□□ -1.75
SSSCA1O60232 AC233702.9-201ENST00000581528 203 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.11□□□□□ -1.75
SSSCA1O60232 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSSCA1O60232 MIR193BHG-214ENST00000641765 509 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.11□□□□□ -1.75
SSSCA1O60232 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 SOCS5P3-201ENST00000425115 1576 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.1□□□□□ -1.75
SSSCA1O60232 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSSCA1O60232 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSSCA1O60232 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSSCA1O60232 RN7SKP292-201ENST00000365522 317 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.1□□□□□ -1.75
SSSCA1O60232 SLC20A1P1-201ENST00000413906 956 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSSCA1O60232 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 FABP7P2-201ENST00000429946 379 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.1□□□□□ -1.75
SSSCA1O60232 RHEBP2-201ENST00000450289 600 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC104339.1-201ENST00000465478 348 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 RN7SL51P-201ENST00000468230 285 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC108751.2-201ENST00000469993 231 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AP002884.1-201ENST00000479691 655 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 RNA5SP464-201ENST00000516251 108 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC012400.1-201ENST00000518452 381 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSSCA1O60232 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.1□□□□□ -1.75
SSSCA1O60232 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.1□□□□□ -1.75
SSSCA1O60232 AC005479.3-201ENST00000602790 431 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC097505.1-201ENST00000610199 565 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 CU639417.4-201ENST00000623928 207 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.1□□□□□ -1.75
SSSCA1O60232 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSSCA1O60232 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
SSSCA1O60232 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SSSCA1O60232 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SSSCA1O60232 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.1□□□□□ -1.75
SSSCA1O60232 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.1□□□□□ -1.75
SSSCA1O60232 AC092435.4-201ENST00000623012 4159 ntBASIC4.1□□□□□ -1.75
SSSCA1O60232 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSSCA1O60232 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.09□□□□□ -1.75
SSSCA1O60232 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSSCA1O60232 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.09□□□□□ -1.75
SSSCA1O60232 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AP000580.1-201ENST00000404439 358 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 OR6E1P-201ENST00000414424 923 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 CKS1BP6-201ENST00000424932 240 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.09□□□□□ -1.75
SSSCA1O60232 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.09□□□□□ -1.75
SSSCA1O60232 TXNP5-201ENST00000441043 315 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 OR11I1P-201ENST00000486033 954 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 RN7SL441P-201ENST00000492388 296 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.09□□□□□ -1.75
SSSCA1O60232 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AC006512.2-201ENST00000543250 486 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.09□□□□□ -1.75
SSSCA1O60232 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSSCA1O60232 BLZF2P-201ENST00000553776 1130 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.09□□□□□ -1.75
SSSCA1O60232 AC000068.2-201ENST00000608816 460 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 AL139407.1-201ENST00000613826 1175 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 FO681491.1-202ENST00000623392 737 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 AC007683.2-201ENST00000624681 714 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSSCA1O60232 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms