Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TCEA1P4-201ENST00000415066 844 ntBASIC7.06□□□□□ -1.28
SOX1O00570 ATG4AP1-201ENST00000416893 538 ntBASIC7.06□□□□□ -1.28
SOX1O00570 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.06□□□□□ -1.28
SOX1O00570 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.06□□□□□ -1.28
SOX1O00570 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 RPL5P6-201ENST00000425640 886 ntBASIC7.06□□□□□ -1.28
SOX1O00570 USP9YP18-201ENST00000425912 695 ntBASIC7.06□□□□□ -1.28
SOX1O00570 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.06□□□□□ -1.28
SOX1O00570 AC245452.2-201ENST00000435222 392 ntBASIC7.06□□□□□ -1.28
SOX1O00570 SUMO2P3-201ENST00000438311 288 ntBASIC7.06□□□□□ -1.28
SOX1O00570 AC002542.1-201ENST00000440683 193 ntBASIC7.06□□□□□ -1.28
SOX1O00570 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SOX1O00570 EPS15P1-201ENST00000448836 336 ntBASIC7.06□□□□□ -1.28
SOX1O00570 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 AC108161.1-201ENST00000461060 402 ntBASIC7.06□□□□□ -1.28
SOX1O00570 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 AC026254.2-201ENST00000475295 371 ntBASIC7.06□□□□□ -1.28
SOX1O00570 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.06□□□□□ -1.28
SOX1O00570 PRMT5P1-201ENST00000514351 598 ntBASIC7.06□□□□□ -1.28
SOX1O00570 RNU6-506P-201ENST00000516553 94 ntBASIC7.06□□□□□ -1.28
SOX1O00570 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 NTS-203ENST00000551529 801 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.06□□□□□ -1.28
SOX1O00570 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC7.06□□□□□ -1.28
SOX1O00570 AP005262.1-201ENST00000582646 997 ntBASIC7.06□□□□□ -1.28
SOX1O00570 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 AC012360.2-201ENST00000609349 391 ntBASIC7.06□□□□□ -1.28
SOX1O00570 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC7.06□□□□□ -1.28
SOX1O00570 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 MIR7155-201ENST00000615925 56 ntBASIC7.06□□□□□ -1.28
SOX1O00570 AC037198.3-201ENST00000616754 526 ntBASIC7.06□□□□□ -1.28
SOX1O00570 AL731566.2-201ENST00000618971 317 ntBASIC7.06□□□□□ -1.28
SOX1O00570 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 AC087821.2-201ENST00000637086 450 ntBASIC7.06□□□□□ -1.28
SOX1O00570 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
SOX1O00570 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 AL353743.4-201ENST00000422653 1547 ntBASIC7.06□□□□□ -1.28
SOX1O00570 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 PRNCR1-201ENST00000635449 12727 ntBASIC7.06□□□□□ -1.28
SOX1O00570 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.06□□□□□ -1.28
SOX1O00570 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SOX1O00570 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 RNU6-259P-201ENST00000383999 107 ntBASIC7.05□□□□□ -1.28
SOX1O00570 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SOX1O00570 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.05□□□□□ -1.28
SOX1O00570 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SOX1O00570 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.05□□□□□ -1.28
SOX1O00570 GTF2IP23-201ENST00000423746 351 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.05□□□□□ -1.28
SOX1O00570 AC008072.1-201ENST00000434254 824 ntBASIC7.05□□□□□ -1.28
SOX1O00570 B3GNT2P1-201ENST00000434960 952 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AC023512.1-201ENST00000444513 499 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 AP006222.1-205ENST00000450734 457 ntBASIC7.05□□□□□ -1.28
SOX1O00570 AC066616.1-201ENST00000486795 413 ntBASIC7.05□□□□□ -1.28
SOX1O00570 Y_RNA.702-201ENST00000516843 96 ntBASIC7.05□□□□□ -1.28
SOX1O00570 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.05□□□□□ -1.28
SOX1O00570 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.05□□□□□ -1.28
SOX1O00570 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms