Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.9□□□□□ -1.63
UPK1AO00322 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.9□□□□□ -1.63
UPK1AO00322 RN7SL189P-201ENST00000468631 289 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 SIAH1P1-201ENST00000479411 923 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.9□□□□□ -1.63
UPK1AO00322 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.9□□□□□ -1.63
UPK1AO00322 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.9□□□□□ -1.63
UPK1AO00322 HNRNPRP2-201ENST00000528421 743 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.9□□□□□ -1.63
UPK1AO00322 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.9□□□□□ -1.63
UPK1AO00322 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
UPK1AO00322 AC012146.2-201ENST00000576545 416 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.9□□□□□ -1.63
UPK1AO00322 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.9□□□□□ -1.63
UPK1AO00322 FKBP1AP1-201ENST00000594588 318 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 AC015871.5-202ENST00000623252 701 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 CYP4F35P-202ENST00000636121 390 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.9□□□□□ -1.63
UPK1AO00322 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
UPK1AO00322 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
UPK1AO00322 AC011447.7-201ENST00000624228 1590 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.9□□□□□ -1.63
UPK1AO00322 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
UPK1AO00322 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
UPK1AO00322 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
UPK1AO00322 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
UPK1AO00322 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
UPK1AO00322 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
UPK1AO00322 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
UPK1AO00322 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UPK1AO00322 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UPK1AO00322 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
UPK1AO00322 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UPK1AO00322 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
UPK1AO00322 SNORA67-201ENST00000384423 137 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 MIR1271-201ENST00000408537 86 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.89□□□□□ -1.63
UPK1AO00322 AC093655.2-201ENST00000425735 631 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.89□□□□□ -1.63
UPK1AO00322 RPL7L1P9-201ENST00000431298 745 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 CFL1P1-202ENST00000432948 411 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 AL161722.2-201ENST00000434731 981 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 GAPDHP58-201ENST00000438477 1006 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.89□□□□□ -1.63
UPK1AO00322 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.89□□□□□ -1.63
UPK1AO00322 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.89□□□□□ -1.63
UPK1AO00322 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.89□□□□□ -1.63
UPK1AO00322 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 AC011445.2-201ENST00000599274 173 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 AC069307.1-201ENST00000602820 447 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 AC018695.5-201ENST00000605872 315 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.89□□□□□ -1.63
UPK1AO00322 AC109309.2-201ENST00000612597 332 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.89□□□□□ -1.63
UPK1AO00322 AC022106.2-201ENST00000620114 757 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.89□□□□□ -1.63
UPK1AO00322 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.89□□□□□ -1.63
UPK1AO00322 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.89□□□□□ -1.63
UPK1AO00322 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.89□□□□□ -1.63
UPK1AO00322 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
UPK1AO00322 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
UPK1AO00322 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UPK1AO00322 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
UPK1AO00322 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 AL022311.1-201ENST00000623726 19416 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
UPK1AO00322 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
UPK1AO00322 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.88□□□□□ -1.63
UPK1AO00322 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UPK1AO00322 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
UPK1AO00322 U3.3-201ENST00000362986 216 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.88□□□□□ -1.63
UPK1AO00322 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
UPK1AO00322 RNU1-74P-201ENST00000384108 171 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 OR8V1P-201ENST00000395193 873 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 RPL35AP24-201ENST00000413846 330 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.88□□□□□ -1.63
UPK1AO00322 GNG5P5-201ENST00000420444 220 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.88□□□□□ -1.63
UPK1AO00322 AC015864.1-201ENST00000496512 544 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 PGAM1P13-201ENST00000507497 754 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 HMGB3P16-201ENST00000508037 287 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 BX510359.5-201ENST00000515651 304 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 RNU6-964P-201ENST00000516524 69 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 AC105031.1-201ENST00000518550 476 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 IGKV2-18-201ENST00000522607 343 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 AC027026.1-201ENST00000532323 742 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.88□□□□□ -1.63
UPK1AO00322 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.88□□□□□ -1.63
UPK1AO00322 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.88□□□□□ -1.63
UPK1AO00322 MIR6837-201ENST00000620884 64 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.88□□□□□ -1.63
UPK1AO00322 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.88□□□□□ -1.63
UPK1AO00322 CASC19-264ENST00000641912 1184 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
UPK1AO00322 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UPK1AO00322 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.88□□□□□ -1.63
UPK1AO00322 AC097063.1-201ENST00000426714 1797 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms