Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 MAPK10-338ENST00000641647 3362 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC068870.3-201ENST00000625077 2536 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AL133388.1-201ENST00000404509 287 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC106901.1-201ENST00000425086 698 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC097523.2-201ENST00000435551 652 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 RPL12P18-201ENST00000437175 325 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 SPRYD7P1-201ENST00000443861 570 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 RPS26P39-201ENST00000469206 341 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 SIAH1P1-201ENST00000479411 923 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 MTND3P6-201ENST00000485242 339 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AGGF1P3-201ENST00000493675 1213 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 IGBP1P4-201ENST00000503202 879 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 HMGN1P9-201ENST00000515212 298 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC005000.1-201ENST00000536192 288 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC090022.1-201ENST00000546569 311 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 MIR4489-201ENST00000578869 62 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AP002884.5-201ENST00000595053 1132 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AP000864.1-201ENST00000609424 650 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC244107.2-201ENST00000611773 76 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AL512624.1-201ENST00000613638 469 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC007204.2-201ENST00000615022 616 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AL162574.1-201ENST00000615702 950 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 MIR8080-201ENST00000622224 89 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4BQ9Y4P1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AC008079.2-201ENST00000623543 20396 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 MIR133B-201ENST00000362210 119 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 RN7SKP162-201ENST00000363605 345 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AC005522.1-201ENST00000395416 346 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 OR4K12P-201ENST00000406538 961 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 NPM1P4-201ENST00000414095 812 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms