Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC235565.1-201ENST00000456962 1325 ntBASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.39□□□□□ -1.39
CTNNA3Q9UI47 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AL353796.1-201ENST00000561542 3241 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 RNA5SP339-201ENST00000390987 122 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AL133270.1-201ENST00000402635 279 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 DPPA2P3-201ENST00000411853 655 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 RPL7AP49-201ENST00000429522 581 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC124944.2-201ENST00000429866 1242 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AL591438.1-201ENST00000433508 581 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AL645937.3-201ENST00000453647 936 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC079168.1-201ENST00000458741 345 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 RN7SL329P-201ENST00000467740 299 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC058823.1-201ENST00000485315 474 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC126177.5-201ENST00000549599 178 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 RBM22P1-201ENST00000578589 1214 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 MIR6837-201ENST00000620884 64 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC073869.7-201ENST00000640874 297 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 DDX18P6-201ENST00000450119 1997 ntBASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA3Q9UI47 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 HYALP1-201ENST00000417674 1279 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 FAM96AP1-201ENST00000430879 482 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 DNAJB5P1-201ENST00000454004 806 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 RPEP1-201ENST00000504507 658 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 FTH1P11-201ENST00000517577 551 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 AC020937.1-201ENST00000519677 1013 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 HAUS8P1-201ENST00000549005 542 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 AC008115.4-201ENST00000619780 775 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 AC020633.1-201ENST00000468439 2247 ntBASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CTNNA3Q9UI47 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 RN7SKP153-201ENST00000365026 316 ntBASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 OR4K12P-201ENST00000406538 961 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms