Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AL137141.1-201ENST00000624622 4836 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 HSPA8P18-201ENST00000439846 1928 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 RN7SKP113-201ENST00000363891 295 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 SNORA2.3-201ENST00000383920 135 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AC073850.1-201ENST00000449243 255 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 RPL7P61-201ENST00000451721 751 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 HIGD1AP5-201ENST00000529959 259 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 OR5D15P-201ENST00000531671 942 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AC027216.1-201ENST00000577726 685 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 MIR4691-201ENST00000583764 85 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AL022394.1-201ENST00000606979 292 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 AC009120.7-201ENST00000623452 780 ntBASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
NPC1L1Q9UHC9 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 TRIM51GP-201ENST00000534741 1350 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AL109941.1-201ENST00000401925 229 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AL645733.1-201ENST00000402250 217 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 FABP7P2-201ENST00000429946 379 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 PSMD10P3-201ENST00000437000 448 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AC090602.1-201ENST00000469695 252 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 RPL37AP8-201ENST00000494116 276 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 SNORA70.11-201ENST00000515987 138 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 SNORA70.13-201ENST00000516116 138 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 RNA5SP43-201ENST00000516559 110 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AC019322.1-201ENST00000571869 389 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 MIR3691-201ENST00000578066 90 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AL049539.1-201ENST00000611964 459 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AC016542.2-201ENST00000624201 619 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 AC073342.3-201ENST00000624211 193 ntBASIC6.94□□□□□ -1.3
NPC1L1Q9UHC9 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 RN7SKP186-201ENST00000365371 303 ntBASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 AC007618.1-201ENST00000366455 732 ntBASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 U3.23-201ENST00000391132 200 ntBASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 OR7E125P-201ENST00000443450 846 ntBASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 AC021660.1-201ENST00000465006 554 ntBASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 AC017007.3-201ENST00000479865 435 ntBASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 AC087763.1-201ENST00000603391 286 ntBASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 AC133644.2-201ENST00000608142 540 ntBASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPC1L1Q9UHC9 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 AC022417.1-201ENST00000624768 1303 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 RN7SKP104-201ENST00000362605 328 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 SEPT7P2-202ENST00000398921 823 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 VN1R54P-201ENST00000435210 1049 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms