Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 NR1H5P-201ENST00000452683 1377 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 CASC19-221ENST00000641309 1382 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC093849.1-201ENST00000563631 2209 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC017079.1-201ENST00000333650 415 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 MIR323A-201ENST00000362199 86 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 RNA5SP242-201ENST00000364171 118 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 RNA5SP132-201ENST00000364725 118 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 NUDT19P3-201ENST00000404698 555 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AL035079.1-201ENST00000405210 287 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 MARK2P12-201ENST00000420129 585 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 RPS4XP16-201ENST00000427198 791 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 SPRYD7P1-201ENST00000443861 570 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC108693.1-201ENST00000496068 432 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC015864.1-201ENST00000496512 544 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AL136038.1-201ENST00000497246 351 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 UGT2A3P7-201ENST00000510485 734 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC006363.1-201ENST00000603806 463 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC079395.2-201ENST00000610982 737 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC109309.2-201ENST00000612597 332 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 MIR6837-201ENST00000620884 64 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC073869.7-201ENST00000640874 297 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 SCARNA15-201ENST00000607520 4325 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 AC063976.2-201ENST00000425667 3556 ntBASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS29Q9UBQ0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 OOSP1-201ENST00000398992 1270 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 MIR1182-201ENST00000408363 97 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AC007738.1-201ENST00000413892 348 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 COX6CP13-201ENST00000428703 226 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AL121776.1-201ENST00000429337 372 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 RPL7L1P9-201ENST00000431298 745 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 SETP20-201ENST00000457046 852 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 COX6B1P2-201ENST00000489624 230 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 RPL7P51-201ENST00000490532 749 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 BX510359.5-201ENST00000515651 304 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 FAM72A-208ENST00000607379 1139 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AL512356.3-201ENST00000623005 461 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AP000648.2-201ENST00000624182 404 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AC136428.4-201ENST00000634254 1155 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 AP005432.1-201ENST00000580891 3485 ntBASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS29Q9UBQ0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC027279.1-201ENST00000568885 4284 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms