Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 AC120338.1-201ENST00000625074 1541 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 AC025031.4-201ENST00000621248 3271 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 SNORA70C-201ENST00000384538 135 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 MIR659-201ENST00000384963 97 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 RPL7AP61-201ENST00000443410 636 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 AC108751.3-201ENST00000461814 1020 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 AL445567.2-201ENST00000618935 498 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 OR7E122P-202ENST00000641144 6171 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 GLUD1P9-201ENST00000420997 1173 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC007016.1-201ENST00000512110 244 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 HMGN1P9-201ENST00000515212 298 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 MTCO1P35-201ENST00000515270 228 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 SCARNA10-201ENST00000459255 330 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 RPS12P31-201ENST00000491419 398 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC004076.2-201ENST00000620532 3323 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AL592148.3-201ENST00000608771 2646 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 RPL34P27-201ENST00000428810 349 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 SLC25A14P1-201ENST00000502867 901 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.16□□□□□ -1.58
CHD7Q9P2D1 RN7SL802P-201ENST00000577858 299 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC015712.7-201ENST00000615211 635 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 AC034229.5-201ENST00000624258 185 ntBASIC5.16□□□□□ -1.58
CHD7Q9P2D1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.15□□□□□ -1.58
CHD7Q9P2D1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CHD7Q9P2D1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.15□□□□□ -1.58
CHD7Q9P2D1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.15□□□□□ -1.58
CHD7Q9P2D1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.15□□□□□ -1.58
CHD7Q9P2D1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.15□□□□□ -1.58
CHD7Q9P2D1 AC114755.5-201ENST00000447760 831 ntBASIC5.15□□□□□ -1.58
CHD7Q9P2D1 RPS27AP16-201ENST00000492222 470 ntBASIC5.15□□□□□ -1.58
CHD7Q9P2D1 AC090058.1-201ENST00000498788 435 ntBASIC5.15□□□□□ -1.58
CHD7Q9P2D1 RNU1-45P-201ENST00000517191 141 ntBASIC5.15□□□□□ -1.58
CHD7Q9P2D1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CHD7Q9P2D1 RPL7P50-201ENST00000600588 727 ntBASIC5.15□□□□□ -1.58
CHD7Q9P2D1 AC010478.1-201ENST00000601500 6762 ntBASIC5.15□□□□□ -1.59
CHD7Q9P2D1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 RPS17P8-201ENST00000434525 335 ntBASIC5.15□□□□□ -1.59
CHD7Q9P2D1 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 RN7SL443P-201ENST00000464331 290 ntBASIC5.15□□□□□ -1.59
CHD7Q9P2D1 NDUFB4P12-201ENST00000513465 390 ntBASIC5.15□□□□□ -1.59
CHD7Q9P2D1 SNORA31.9-201ENST00000516429 84 ntBASIC5.15□□□□□ -1.59
CHD7Q9P2D1 BNIP3P35-201ENST00000604530 490 ntBASIC5.15□□□□□ -1.59
CHD7Q9P2D1 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 SAMMSON-210ENST00000641260 1308 ntBASIC5.15□□□□□ -1.59
CHD7Q9P2D1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CHD7Q9P2D1 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms