Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL031985.1-201ENST00000392713 418 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 SFR1P2-201ENST00000421841 730 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC245884.2-201ENST00000426257 404 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 TUBB4BP6-201ENST00000437576 479 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AL445466.1-201ENST00000448432 357 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 NPM1P39-201ENST00000449818 867 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC016027.4-201ENST00000450866 277 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 snoU109.3-201ENST00000459477 145 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC114728.1-201ENST00000488289 483 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 snoU109.6-201ENST00000516831 118 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 KCTD9P4-201ENST00000526766 1166 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 MIR4760-201ENST00000585040 80 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC011497.2-201ENST00000600255 639 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AL606834.3-201ENST00000602615 496 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC069431.2-201ENST00000604149 1099 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 LSM1P2-201ENST00000604911 322 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC093673.2-201ENST00000609674 331 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC096861.1-201ENST00000616652 240 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 uc_338.9-201ENST00000617424 182 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 STMN1P1-201ENST00000617809 440 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC084824.4-201ENST00000620106 731 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 AC103703.1-201ENST00000634783 663 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 AL592429.1-201ENST00000403909 1473 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 AL355488.2-201ENST00000609909 2850 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 RBPJP7-201ENST00000442803 1447 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 RBPJP5-201ENST00000449433 1447 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 HDAC1P2-201ENST00000453661 1398 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 IGKV7-3-201ENST00000357453 298 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 RNU105B-201ENST00000364478 208 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 SNORA17A-201ENST00000391185 133 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 RPS15AP30-201ENST00000420976 390 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 CHEK2P5-201ENST00000423877 246 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC009237.1-201ENST00000442127 744 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 RPL31P44-201ENST00000447680 377 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 RN7SL193P-201ENST00000491708 276 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC083795.1-201ENST00000491760 320 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 TRAV31-201ENST00000502780 342 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC114781.3-201ENST00000512083 142 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 CYB5AP5-201ENST00000549779 389 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 SULT1C2P2-201ENST00000562517 294 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC092121.1-201ENST00000569452 202 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC091193.1-201ENST00000604640 448 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC024589.2-201ENST00000605642 1294 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC109309.2-201ENST00000612597 332 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC022079.2-201ENST00000619739 566 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms