Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC88CQ9P219 AP001284.1-201ENST00000528393 2118 ntBASIC4.98□□□□□ -1.61
CCDC88CQ9P219 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 RNU1-74P-201ENST00000384108 171 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AL590762.4-201ENST00000425885 253 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC009784.1-201ENST00000426484 460 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 MIR7703-201ENST00000620784 77 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 IRF5P1-201ENST00000504852 2164 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC092376.2-201ENST00000622621 4116 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 MRRFP1-201ENST00000435941 1675 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC026523.2-201ENST00000625039 7739 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC103591.2-201ENST00000265259 766 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 SNORA67-201ENST00000384423 137 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 SNORA48.4-201ENST00000391089 134 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AL009179.1-201ENST00000406085 265 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 RNF10P1-201ENST00000418589 369 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 RPL5P25-201ENST00000441148 775 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 PRPF38AP1-201ENST00000451976 933 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 RPL7P41-201ENST00000485823 957 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC109464.1-201ENST00000511091 819 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC022832.1-201ENST00000530718 645 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC021006.3-201ENST00000530771 192 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 AC044860.2-201ENST00000561005 179 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 MIR4436B2-201ENST00000581415 91 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 MIR4436B1-201ENST00000583272 91 ntBASIC4.97□□□□□ -1.61
CCDC88CQ9P219 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC88CQ9P219 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 MRPS21P2-201ENST00000424704 264 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 AC112498.1-201ENST00000444401 332 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 NOP56P2-201ENST00000447491 769 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 SNRPCP3-201ENST00000474888 476 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 AC006116.3-201ENST00000592968 361 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 AP005432.2-201ENST00000608162 586 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 CASC19-221ENST00000641309 1382 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 SNURFL-201ENST00000309296 343 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 RNA5SP87-201ENST00000384155 118 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 HYALP1-201ENST00000417674 1279 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 RPS27P18-201ENST00000431701 247 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 HIGD1AP8-201ENST00000453927 274 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 AC090114.3-201ENST00000479267 829 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 RPS24P16-201ENST00000497294 392 ntBASIC4.96□□□□□ -1.62
CCDC88CQ9P219 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC88CQ9P219 AC079298.1-201ENST00000625026 1619 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AL022322.2-201ENST00000624072 20397 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms