Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
VTA1Q9NP79 AP000432.2-201ENST00000624164 2048 ntBASIC6.59□□□□□ -1.36
VTA1Q9NP79 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
VTA1Q9NP79 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
VTA1Q9NP79 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 RNU6-316P-201ENST00000391027 107 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 RN7SKP278-201ENST00000410504 342 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 NPM1P4-201ENST00000414095 812 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 HMGA1P8-201ENST00000414130 321 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 OR6E1P-201ENST00000414424 923 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 MTCO1P53-201ENST00000441633 699 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 SPRYD7P1-201ENST00000443861 570 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 EIF2S2P2-201ENST00000447161 982 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 EXOSC3P1-201ENST00000448649 500 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AL162739.1-201ENST00000450606 307 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AL139824.2-201ENST00000458731 1095 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 SIAH1P1-201ENST00000479411 923 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC009120.1-201ENST00000493458 473 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 RN7SKP34-201ENST00000516142 244 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 MRPS16P1-201ENST00000523462 412 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 DUX4L52-201ENST00000549363 777 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AP001160.4-201ENST00000596971 382 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC079610.2-201ENST00000604818 690 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC004890.3-201ENST00000605566 1095 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 SDR42E1P1-201ENST00000611327 477 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AL359513.1-201ENST00000614364 557 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC008115.3-201ENST00000614874 549 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC009464.1-201ENST00000615731 469 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 U1.34-201ENST00000618578 162 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 AC022034.1-201ENST00000512867 2156 ntBASIC6.58□□□□□ -1.36
VTA1Q9NP79 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTA1Q9NP79 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
VTA1Q9NP79 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AF228730.1-201ENST00000397972 663 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 Z93019.1-201ENST00000416450 973 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL355433.1-201ENST00000422804 300 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC007568.1-201ENST00000422912 471 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 OR5W1P-201ENST00000423705 938 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC113412.1-201ENST00000425840 504 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 FMO7P-201ENST00000436045 768 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 CUBNP2-201ENST00000443534 1139 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms