Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC066692.1-201ENST00000421721 457 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AC004980.3-201ENST00000447046 365 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AC104634.1-201ENST00000452720 462 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 HLA-DPA3-207ENST00000454398 229 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 CTSLP6-201ENST00000458273 1002 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AL591473.1-201ENST00000464297 313 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 RN7SKP46-201ENST00000515942 234 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 Vault.2-201ENST00000516519 98 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 MTND2P7-201ENST00000521337 640 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 MIR7109-201ENST00000613748 65 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 LINC01355-201ENST00000566551 5444 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 AL078595.2-201ENST00000605309 1780 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.31□□□□□ -1.4
UPF2Q9HAU5 CASC19-221ENST00000641309 1382 ntBASIC6.31□□□□□ -1.4
UPF2Q9HAU5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 AC013442.1-201ENST00000397347 228 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 RPL36AP10-201ENST00000421785 322 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 HSPE1P16-201ENST00000426640 348 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 AL139148.1-201ENST00000427122 680 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 AL389925.1-201ENST00000432257 728 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 RN7SL51P-201ENST00000468230 285 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 AC005412.2-201ENST00000492004 341 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 RN7SL447P-201ENST00000494711 245 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 AC097173.1-201ENST00000505862 819 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 AP005262.1-201ENST00000582646 997 ntBASIC6.3□□□□□ -1.4
UPF2Q9HAU5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF2Q9HAU5 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 RNA5SP46-201ENST00000362370 120 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 MIR1271-201ENST00000408537 86 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 SUMO2P8-201ENST00000434672 286 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC110602.1-201ENST00000437414 318 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC138938.1-201ENST00000515431 782 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC027308.1-201ENST00000517993 110 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 HMGB1P40-201ENST00000525121 540 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 NDUFB4P11-201ENST00000560510 395 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 MTATP6P25-201ENST00000574491 261 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC006272.2-201ENST00000594725 163 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC073593.1-201ENST00000624500 411 ntBASIC6.29□□□□□ -1.4
UPF2Q9HAU5 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF2Q9HAU5 AC020633.1-201ENST00000468439 2247 ntBASIC6.28□□□□□ -1.4
UPF2Q9HAU5 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms