Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL512593.1-201ENST00000444758 779 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC069540.1-201ENST00000446320 988 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC023245.1-201ENST00000468501 517 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 H3F3AP5-201ENST00000475267 429 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RPL23AP40-201ENST00000487630 390 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RN7SL362P-201ENST00000494228 267 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC106822.1-201ENST00000502647 526 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RN7SKP141-201ENST00000516167 338 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC006512.2-201ENST00000543250 486 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 ZNF321P-202ENST00000550843 495 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 MIR4789-201ENST00000577469 82 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC025175.1-201ENST00000606482 759 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AL136097.3-201ENST00000611097 505 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 MIR6729-201ENST00000618194 65 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 MIR6811-201ENST00000620409 58 ntBASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
AMBRA1Q9C0C7 AC011416.1-201ENST00000514947 1732 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC245096.1-201ENST00000413104 546 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AL354766.1-201ENST00000423396 542 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC084290.1-201ENST00000434995 374 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AL138787.1-202ENST00000437804 898 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC073052.1-201ENST00000440417 714 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CUBNP2-201ENST00000443534 1139 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 REG1CP-206ENST00000447469 496 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CST12P-201ENST00000457644 362 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC079203.1-201ENST00000487972 404 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC007346.1-201ENST00000569208 867 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC061975.8-201ENST00000587058 721 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC060780.2-201ENST00000589047 198 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 ZNF92P3-201ENST00000596594 954 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC005252.1-201ENST00000604518 1063 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AL139344.1-201ENST00000605228 195 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC005899.7-201ENST00000618199 588 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AL122023.1-201ENST00000622847 530 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC004943.3-201ENST00000624116 600 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC092159.4-201ENST00000624944 550 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AC068620.4-201ENST00000636730 1182 ntBASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AMBRA1Q9C0C7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms