Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 SNX18P3-202ENST00000565670 1750 ntBASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXP3Q9BZS1 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC119674.1-202ENST00000641333 1860 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 HSPD1P7-201ENST00000447985 1686 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC010894.1-201ENST00000313760 361 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 RNU1-59P-201ENST00000364829 162 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AL929472.1-201ENST00000417484 429 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 BTF3P9-201ENST00000418784 283 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC006960.1-201ENST00000419980 153 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 CYP4F30P-202ENST00000420048 405 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC245884.2-201ENST00000426257 404 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AL022331.1-201ENST00000429025 477 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 MTCYBP1-201ENST00000454315 1119 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 RPL30P6-201ENST00000475925 342 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 OR7E157P-201ENST00000494376 911 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 BLZF2P-201ENST00000553776 1130 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC107958.1-201ENST00000556576 290 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 RPL7AP69-201ENST00000595306 806 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC073544.2-201ENST00000601155 540 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC087241.4-201ENST00000612441 480 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 U1.25-201ENST00000614085 162 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC025588.4-201ENST00000615802 908 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 U1.34-201ENST00000618578 162 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 U1.31-201ENST00000620022 160 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC068213.1-201ENST00000625124 226 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 NEPNP-201ENST00000404786 1371 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AC010132.4-201ENST00000569883 1368 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 CAP1P2-201ENST00000417455 1409 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 NCLP2-201ENST00000416078 1462 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 SHQ1P1-201ENST00000437111 1544 ntBASIC6.66□□□□□ -1.34
FOXP3Q9BZS1 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 AC027279.4-201ENST00000624371 2072 ntBASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 FUNDC2P3-201ENST00000334716 533 ntBASIC6.65□□□□□ -1.34
FOXP3Q9BZS1 NACA3P-201ENST00000359690 648 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms