Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AP000473.2-201ENST00000602659 1537 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AC092376.2-201ENST00000622621 4116 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 MIR550A3-201ENST00000390735 95 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 RNU1-77P-201ENST00000390868 162 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AL139128.1-201ENST00000413921 941 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 FABP7P2-201ENST00000429946 379 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 NIFKP7-201ENST00000503365 834 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 RNA5SP373-201ENST00000517271 95 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AC040958.1-201ENST00000561102 201 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AC022884.2-201ENST00000578535 580 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 FKBP1AP1-201ENST00000594588 318 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AL512329.2-201ENST00000607350 548 ntBASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
UPF3BQ9BZI7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.27□□□□□ -1.4
UPF3BQ9BZI7 AC004817.4-201ENST00000602396 3625 ntBASIC6.27□□□□□ -1.4
UPF3BQ9BZI7 SMG1P7-201ENST00000565246 2704 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 RNU1-146P-201ENST00000364015 165 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 COX5BP7-201ENST00000414780 274 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AC011225.1-201ENST00000457751 369 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AC100832.1-201ENST00000471945 383 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 RPS24P16-201ENST00000497294 392 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 RPEP1-201ENST00000504507 658 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 RPL10P14-201ENST00000565265 298 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 MIR4660-201ENST00000583549 74 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AC007204.2-201ENST00000615022 616 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 AC068870.2-201ENST00000620635 389 ntBASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
UPF3BQ9BZI7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC023421.1-201ENST00000590535 1785 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 HSPA8P15-201ENST00000401676 786 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 RBMY2KP-201ENST00000418221 992 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 DSTNP5-201ENST00000427921 523 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms