Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 HMGB1P40-201ENST00000525121 540 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC022404.1-201ENST00000555320 273 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC127024.5-201ENST00000580085 462 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC005229.3-201ENST00000603438 323 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 SUMO2P15-201ENST00000604285 278 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 RPSAP73-201ENST00000614820 330 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC007342.5-201ENST00000571340 2142 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 MRRFP1-201ENST00000435941 1675 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AC003985.2-201ENST00000562268 1669 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 OR3A2-201ENST00000408891 1076 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 RPL35AP24-201ENST00000413846 330 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 BX323845.1-201ENST00000432417 179 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 RPL12P18-201ENST00000437175 325 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 TCEA1P3-201ENST00000443005 880 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 RN7SL51P-201ENST00000468230 285 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 RPS26P39-201ENST00000469206 341 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 COX6B1P2-201ENST00000489624 230 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AC097173.1-201ENST00000505862 819 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 PGAM1P13-201ENST00000507497 754 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 IGKV2-18-201ENST00000522607 343 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 OR4A46P-201ENST00000527255 933 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 BNIP3P32-201ENST00000600015 554 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 AC099654.3-201ENST00000447087 1546 ntBASIC4.77□□□□□ -1.65
RSPO3Q9BXY4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AL672167.1-204ENST00000641875 3017 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 HSPA8P15-201ENST00000401676 786 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 MIR1182-201ENST00000408363 97 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 MIR1178-201ENST00000408396 91 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 CYCSP6-201ENST00000434498 302 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC020779.1-201ENST00000478757 796 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC008410.1-201ENST00000483777 339 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 IGLV2-28-201ENST00000520681 304 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AP006245.2-201ENST00000522004 300 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 HNRNPRP2-201ENST00000528421 743 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 AC134349.2-201ENST00000535136 910 ntBASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.76□□□□□ -1.65
RSPO3Q9BXY4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms