Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 RPL35AP19-201ENST00000469425 329 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC020779.1-201ENST00000478757 796 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC074087.1-201ENST00000512059 724 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC112191.2-201ENST00000522428 333 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC015720.2-201ENST00000567709 334 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC011840.5-201ENST00000582125 771 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 MIR4271-201ENST00000582451 67 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 NF1P10-201ENST00000613227 742 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 BX005214.3-202ENST00000619809 325 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AL022393.1-201ENST00000625142 1677 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC092747.4-201ENST00000620519 1861 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC017079.1-201ENST00000333650 415 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 RNA5SP90-201ENST00000364801 99 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 RNU1-74P-201ENST00000384108 171 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 RNA5SP284-201ENST00000384547 118 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 VN1R12P-201ENST00000403778 876 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC013429.2-201ENST00000418798 781 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 NANOGP4-201ENST00000427230 913 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AL161722.2-201ENST00000434731 981 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 NDUFA5P5-201ENST00000468361 342 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 RPL7P40-201ENST00000481703 745 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC005412.2-201ENST00000492004 341 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC023424.1-201ENST00000496058 459 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 RPEP1-201ENST00000504507 658 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC112184.1-201ENST00000505179 312 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC097173.1-201ENST00000505862 819 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 RNU6-941P-201ENST00000516346 108 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 TMEM97P2-201ENST00000517841 403 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC093591.2-201ENST00000565254 3843 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 RNF19BPY-201ENST00000458209 1550 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC000374.1-201ENST00000434698 1745 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 AC097063.1-201ENST00000426714 1797 ntBASIC4.34□□□□□ -1.71
HDHD3Q9BSH5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
HDHD3Q9BSH5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.34□□□□□ -1.72
HDHD3Q9BSH5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HDHD3Q9BSH5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC025574.1-201ENST00000554784 1653 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 AC011447.7-201ENST00000624228 1590 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 RNA5SP510-201ENST00000364697 99 ntBASIC4.33□□□□□ -1.72
HDHD3Q9BSH5 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms