Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC011921.2-201ENST00000589465 152 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 MIR7854-201ENST00000620068 65 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC211486.4-201ENST00000621495 113 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCHD1Q96NR3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 RBPJP6-201ENST00000411556 1431 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 ENSAP3-201ENST00000312710 333 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 RNU4-21P-201ENST00000362802 126 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 ATP5F1P4-201ENST00000397288 746 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AP000357.1-201ENST00000409926 1165 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC066692.1-201ENST00000421721 457 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 USP9YP35-201ENST00000435696 412 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 MTND1P30-201ENST00000441241 901 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL031681.1-201ENST00000443304 400 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL137845.2-201ENST00000444292 988 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL445991.1-201ENST00000450381 475 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC079776.3-201ENST00000450665 370 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC104763.1-201ENST00000475274 360 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC079080.1-201ENST00000479841 822 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 RPL9P33-201ENST00000484311 566 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC117395.1-201ENST00000487390 403 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC114324.2-202ENST00000503812 134 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC079395.1-201ENST00000510981 262 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC109445.1-201ENST00000512356 383 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 OR52H2P-201ENST00000514607 902 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 SETP21-201ENST00000514799 892 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 OR4A6P-201ENST00000534364 970 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC005519.1-201ENST00000554490 601 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC136619.2-201ENST00000563361 631 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 MIR4732-201ENST00000581873 76 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC015818.6-201ENST00000584274 634 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 RPL29P33-201ENST00000587474 316 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC009220.3-201ENST00000604318 586 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC069234.5-201ENST00000611056 416 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms