Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC073429.2-201ENST00000569694 1444 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 RNA5SP234-201ENST00000363916 119 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 SNORA70H-201ENST00000383910 135 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 SNORA70J-201ENST00000384182 135 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 PTP4A1P1-201ENST00000420539 515 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC015983.1-201ENST00000441577 373 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL096829.2-201ENST00000446582 742 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 RN7SL583P-201ENST00000475692 287 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 RPL5P12-201ENST00000477071 851 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 SETP6-201ENST00000479329 568 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 RN7SL570P-201ENST00000484405 292 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC093270.2-201ENST00000486157 792 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 TPT1P8-201ENST00000510120 555 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 CYP4F27P-201ENST00000514557 494 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 MTCYBP19-201ENST00000517463 1124 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AP006245.2-201ENST00000522004 300 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC139697.1-201ENST00000548429 745 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC068620.3-201ENST00000602749 560 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL158050.2-201ENST00000605336 568 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC026741.1-201ENST00000605892 482 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL512329.2-201ENST00000607350 548 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC017076.1-201ENST00000607613 578 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC004241.3-201ENST00000611728 517 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 OR8G7P-201ENST00000616658 848 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL158062.1-201ENST00000619632 745 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL356118.1-201ENST00000635272 1078 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 SPATA2P1-201ENST00000431223 2055 ntBASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB4Q8WW32 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 RNU6-252P-201ENST00000363232 107 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 RNU6-1000P-201ENST00000391066 106 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 GAPDHP42-201ENST00000406848 981 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AL024507.1-201ENST00000412741 274 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 RPA2P2-201ENST00000419698 796 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 OR5W1P-201ENST00000423705 938 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 VN1R42P-201ENST00000424651 344 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC016027.5-201ENST00000427227 210 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 PA2G4P6-201ENST00000438325 1197 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AL645931.1-201ENST00000439737 410 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 OR7E116P-201ENST00000448529 957 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC004815.1-201ENST00000484185 331 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC116562.1-201ENST00000485355 781 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 EIF1P7-201ENST00000487533 337 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC008953.1-201ENST00000497334 318 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC112518.2-201ENST00000508565 425 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 GLRXP2-201ENST00000555594 321 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC096996.1-201ENST00000563813 325 ntBASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB4Q8WW32 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms