Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AP000797.2-201ENST00000475768 606 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RPL7P41-201ENST00000485823 957 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC069304.1-201ENST00000491593 704 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC022826.1-201ENST00000519383 805 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 NRBF2P4-201ENST00000520874 850 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC027369.5-201ENST00000533838 755 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC010547.6-201ENST00000571789 193 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RBM22P1-201ENST00000578589 1214 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC096553.1-201ENST00000605169 829 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AL159169.2-201ENST00000610061 1269 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 CU639417.4-201ENST00000623928 207 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AP003499.2-201ENST00000624100 483 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.09□□□□□ -1.6
CLHC1Q8NHS4 AC073136.1-201ENST00000449426 2884 ntBASIC5.09□□□□□ -1.6
CLHC1Q8NHS4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLHC1Q8NHS4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLHC1Q8NHS4 AC004817.4-201ENST00000602396 3625 ntBASIC5.09□□□□□ -1.6
CLHC1Q8NHS4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.09□□□□□ -1.6
CLHC1Q8NHS4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLHC1Q8NHS4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CLHC1Q8NHS4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 MUC2-202ENST00000613187 4845 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 RBPJP2-201ENST00000618187 1444 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 RNA5SP284-201ENST00000384547 118 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 MTND6P12-201ENST00000428247 522 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC124944.2-201ENST00000429866 1242 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC064862.4-201ENST00000442180 334 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC073109.1-201ENST00000445066 978 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 NOP56P2-201ENST00000447491 769 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 PRPF38AP1-201ENST00000451976 933 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC007998.1-201ENST00000474156 672 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 EIF3LP3-201ENST00000495197 822 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 NIFKP7-201ENST00000503365 834 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC016559.2-201ENST00000510759 359 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC098976.1-201ENST00000513014 541 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 OR8A2P-201ENST00000528631 952 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 MIR4505-201ENST00000582238 73 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC109583.2-201ENST00000617367 129 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 MIR6839-201ENST00000620425 113 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC007683.2-201ENST00000624681 714 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 SMG1P4-204ENST00000523028 4131 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 AC092376.2-201ENST00000622621 4116 ntBASIC5.08□□□□□ -1.6
CLHC1Q8NHS4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 LINC01963-201ENST00000562038 3148 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 MIR133B-201ENST00000362210 119 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 RN7SKP74-201ENST00000362849 309 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms