Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RPS17P5-201ENST00000498293 408 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AL121594.2-201ENST00000541658 472 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 PDCD6IPP2-207ENST00000566321 1069 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 MIR3934-201ENST00000579806 107 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 MIR4260-201ENST00000583107 67 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC068790.7-201ENST00000602347 528 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC068769.1-201ENST00000474767 2426 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RNU1-77P-201ENST00000390868 162 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC007562.1-201ENST00000421819 517 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC023274.2-201ENST00000445264 521 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC105384.2-201ENST00000508433 640 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC024940.3-201ENST00000538551 316 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 MIR4691-201ENST00000583764 85 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC090527.3-201ENST00000619041 548 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC073869.8-201ENST00000641806 335 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC007568.1-201ENST00000422912 471 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 TRBV5-2-201ENST00000489095 273 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC109462.1-201ENST00000491087 368 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RPL21P129-201ENST00000491732 478 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RN7SKP67-201ENST00000515905 235 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC021006.3-201ENST00000530771 192 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AL133406.3-201ENST00000606817 541 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 EIF3FP1-201ENST00000613970 806 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC007996.1-201ENST00000620414 2821 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 THAP12P9-201ENST00000503971 2360 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 RNU4-4P-201ENST00000364588 130 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 Z84478.1-201ENST00000438230 1219 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC079922.1-201ENST00000443291 359 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AP004607.2-201ENST00000533949 322 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 AC127381.1-201ENST00000555979 939 ntBASIC1.62□□□□□ -2.15
SYNE1Q8NF91 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
SYNE1Q8NF91 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 AC093655.2-201ENST00000425735 631 ntBASIC1.61□□□□□ -2.15
SYNE1Q8NF91 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 NXF4-202ENST00000416098 1465 ntBASIC1.61□□□□□ -2.15
SYNE1Q8NF91 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 CHMP1B2P-201ENST00000399581 597 ntBASIC1.61□□□□□ -2.15
SYNE1Q8NF91 AL078599.1-201ENST00000402075 293 ntBASIC1.61□□□□□ -2.15
SYNE1Q8NF91 AC093414.1-201ENST00000434712 514 ntBASIC1.61□□□□□ -2.15
SYNE1Q8NF91 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC1.61□□□□□ -2.15
SYNE1Q8NF91 RPS3AP41-201ENST00000462701 778 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms