Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC71LQ8N9Z2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC007342.9-201ENST00000623877 1385 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 SNORA64.1-201ENST00000362600 132 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC046176.1-201ENST00000435260 1170 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC064862.5-201ENST00000440618 334 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 HMGB3P9-201ENST00000441799 583 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC092754.1-201ENST00000472975 479 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 RPL29P23-201ENST00000486188 442 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 MTND6P2-201ENST00000512226 524 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 RNA5SP96-201ENST00000516041 107 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 RNU6-751P-201ENST00000516382 101 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 IGKV3D-25-201ENST00000519599 235 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 BNIP3P1-201ENST00000547295 580 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 LSM3P2-201ENST00000551246 273 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 EIF1AXP2-201ENST00000555940 413 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 CD24P2-201ENST00000565486 219 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 RN7SL356P-201ENST00000582228 248 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC090953.1-201ENST00000604305 1092 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC117490.2-201ENST00000610042 594 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AL159169.2-201ENST00000610061 1269 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AL391597.1-201ENST00000618707 694 ntBASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC71LQ8N9Z2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AC107027.3-201ENST00000565095 3473 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 RN7SKP257-201ENST00000364525 309 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 RN7SKP6-201ENST00000364795 319 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 RNA5SP223-201ENST00000365174 120 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 HMGB3P7-201ENST00000400214 611 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 DBIP1-201ENST00000401435 260 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 RNA5SP487-201ENST00000410186 122 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 RN7SKP286-201ENST00000410894 299 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 PNKDP1-201ENST00000435914 430 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AC068228.1-201ENST00000461723 211 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AP006245.2-201ENST00000522004 300 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 HMGB1P42-201ENST00000532126 553 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AP000769.2-201ENST00000602344 396 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 MIR6721-201ENST00000617181 87 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AC025262.3-201ENST00000623666 360 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms