Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TSHZ2-205ENST00000626626 670 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC073488.5-201ENST00000631993 754 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 BCL9P1-201ENST00000506012 2561 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC022819.1-201ENST00000563495 3910 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 AC068733.2-201ENST00000605434 1418 ntBASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 VPS35P1-201ENST00000563400 1518 ntBASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 CASC19-204ENST00000641001 2055 ntBASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
DEPDC4Q8N2C3 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 UG0898H09-202ENST00000623646 7040 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 Y_RNA.72-201ENST00000362894 103 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 SNORA73A-201ENST00000364938 206 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RNU1-11P-201ENST00000383975 164 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RNU6-692P-201ENST00000384496 107 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RNA5SP256-201ENST00000390978 113 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RN7SKP26-201ENST00000410247 293 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RNA5SP118-201ENST00000410385 109 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC130464.1-201ENST00000416201 1500 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 SDCBPP2-201ENST00000424643 885 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 WDR95P-201ENST00000425638 1542 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC098828.1-201ENST00000436164 440 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 CBX1P4-201ENST00000439415 457 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 MORF4-201ENST00000447135 971 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RPL23AP20-201ENST00000447965 421 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 GLRXP3-201ENST00000470810 321 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RPL12P31-201ENST00000478433 450 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RPL7AP2-201ENST00000496515 740 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RNU6-1281P-201ENST00000516223 105 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RNU6-1003P-201ENST00000517099 105 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AP003122.4-201ENST00000530980 758 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 MIR5186-201ENST00000577504 120 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC093826.2-201ENST00000579042 108 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC087645.1-201ENST00000588528 291 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 CKS1BP3-201ENST00000600888 237 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AL162413.1-201ENST00000603198 110 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC006238.1-201ENST00000609787 534 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AL136295.6-201ENST00000610486 658 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 AC138904.2-201ENST00000614412 107 ntBASIC7.14□□□□□ -1.27
DEPDC4Q8N2C3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms