Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE4Q8N205 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE4Q8N205 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE4Q8N205 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE4Q8N205 CASC19-243ENST00000641588 1546 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 RNU4-4P-201ENST00000364588 130 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 GNG5P2-201ENST00000372054 207 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE4Q8N205 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 CR848007.2-201ENST00000424918 787 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 RBMY2QP-201ENST00000429799 1147 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 NPM1P48-201ENST00000436002 853 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 RPS11P7-201ENST00000442125 465 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 MTCYBP14-201ENST00000457471 715 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE4Q8N205 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE4Q8N205 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 OR5AM1P-201ENST00000532136 1032 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 AC232271.1-201ENST00000602455 2715 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE4Q8N205 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.78□□□□□ -1.32
SYNE4Q8N205 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SYNE4Q8N205 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE4Q8N205 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE4Q8N205 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.32
SYNE4Q8N205 HSPD1P7-201ENST00000447985 1686 ntBASIC6.77□□□□□ -1.32
SYNE4Q8N205 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 UBE2V1P15-201ENST00000407776 448 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 AP002371.1-201ENST00000463604 433 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 SEPT7P6-201ENST00000469999 1143 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 AC025768.1-201ENST00000510057 267 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 AP001636.2-201ENST00000525517 696 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 AC106785.3-201ENST00000564064 847 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 ABI1P1-201ENST00000603375 1120 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 AF129408.1-201ENST00000608767 431 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 uc_338.18-201ENST00000615451 175 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 AL356118.1-201ENST00000635272 1078 ntBASIC6.77□□□□□ -1.33
SYNE4Q8N205 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE4Q8N205 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
SYNE4Q8N205 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE4Q8N205 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SYNE4Q8N205 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNE4Q8N205 ABCA11P-202ENST00000504019 2110 ntBASIC6.76□□□□□ -1.33
SYNE4Q8N205 AC114947.2-201ENST00000565748 2125 ntBASIC6.76□□□□□ -1.33
SYNE4Q8N205 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNE4Q8N205 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE4Q8N205 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNE4Q8N205 RNGTTP1-201ENST00000420965 728 ntBASIC6.76□□□□□ -1.33
SYNE4Q8N205 AC093655.2-201ENST00000425735 631 ntBASIC6.76□□□□□ -1.33
SYNE4Q8N205 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNE4Q8N205 MTND4LP7-201ENST00000431728 294 ntBASIC6.76□□□□□ -1.33
SYNE4Q8N205 AC091390.1-201ENST00000433904 331 ntBASIC6.76□□□□□ -1.33
SYNE4Q8N205 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNE4Q8N205 AC092647.3-201ENST00000443044 633 ntBASIC6.76□□□□□ -1.33
SYNE4Q8N205 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNE4Q8N205 HMGN1P8-201ENST00000463578 288 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms