Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RPL7P41-201ENST00000485823 957 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 RPS12P31-201ENST00000491419 398 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 RPS24P16-201ENST00000497294 392 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC021193.1-201ENST00000511607 420 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 RNU6-1334P-201ENST00000516032 105 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AL359219.2-201ENST00000555184 348 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 OR11J2P-201ENST00000555298 907 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC008814.1-201ENST00000603797 406 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AL713998.2-201ENST00000604538 1198 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AL162431.4-201ENST00000604674 411 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 SNORA35B-201ENST00000607417 129 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC003985.2-201ENST00000562268 1669 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 C4BPAP1-201ENST00000415474 1893 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AL078595.2-201ENST00000605309 1780 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 U3.3-201ENST00000362986 216 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 RN7SKP153-201ENST00000365026 316 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 RN7SKP273-201ENST00000411392 314 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 CASKP1-201ENST00000412870 582 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 EI24P4-201ENST00000423683 1078 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC090018.1-201ENST00000434369 367 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 CLUHP1-201ENST00000435012 1190 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC016772.1-201ENST00000444170 1261 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC090804.1-201ENST00000448870 490 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC135999.1-201ENST00000478962 479 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC022133.1-201ENST00000490961 571 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 RPL15P21-201ENST00000495592 567 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC008953.1-201ENST00000497334 318 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC006499.3-201ENST00000506077 748 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 IGLV2-28-201ENST00000520681 304 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC022360.1-201ENST00000521058 340 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC022784.5-201ENST00000522241 437 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 OR4A46P-201ENST00000527255 933 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC024940.3-201ENST00000538551 316 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 OR7E18P-201ENST00000592589 702 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC009597.2-201ENST00000604659 592 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AC120036.2-201ENST00000509729 1474 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 AL132656.3-201ENST00000606384 1595 ntBASIC4.87□□□□□ -1.63
C9orf40Q8IXQ3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC090220.1-201ENST00000593078 1699 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms