Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 GYG1P1-201ENST00000460864 698 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AL157777.1-201ENST00000468100 304 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC093719.1-201ENST00000480427 441 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 OR5H3P-201ENST00000502817 919 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 MTCYBP37-201ENST00000510642 1133 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC010625.1-201ENST00000511296 403 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 RN7SKP248-201ENST00000516278 305 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 NRON-201ENST00000517270 370 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 IGLV3-30-201ENST00000524362 298 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AP003396.4-201ENST00000527574 265 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 TOMM20P1-201ENST00000534518 427 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC027281.1-201ENST00000574178 758 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 DHFRP1-201ENST00000579682 559 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AL096803.3-201ENST00000609032 532 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC245100.7-201ENST00000609678 442 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 MIR6793-201ENST00000612376 63 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AL121895.2-201ENST00000619558 447 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC123767.1-202ENST00000620407 817 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC090897.3-201ENST00000636973 1157 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 PARP4P2-201ENST00000446672 3326 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VRK3Q8IV63 AC053481.2-202ENST00000582394 1500 ntBASIC5.79□□□□□ -1.48
VRK3Q8IV63 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK3Q8IV63 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VRK3Q8IV63 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VRK3Q8IV63 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VRK3Q8IV63 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VRK3Q8IV63 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 RNU6-1214P-201ENST00000363650 109 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 GNG5P2-201ENST00000372054 207 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 Y_RNA.604-201ENST00000410574 102 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 BX284632.2-201ENST00000421091 399 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC234781.2-201ENST00000426370 994 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 BX323845.3-201ENST00000428215 527 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 DNAJA1P5-201ENST00000440278 943 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 H3F3BP1-201ENST00000440551 403 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AL512605.1-202ENST00000441919 381 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC016772.1-201ENST00000444170 1261 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AL359955.2-201ENST00000445380 353 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AL133217.1-201ENST00000450980 425 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 ATG12P2-201ENST00000456830 416 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 RPL31P3-201ENST00000458430 332 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 CYCSP20-201ENST00000473154 315 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 TRBV5-2-201ENST00000489095 273 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC091860.1-201ENST00000505723 432 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC114781.3-201ENST00000512083 142 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 SCARNA18.1-201ENST00000516330 83 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 MIR2117-201ENST00000516780 80 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 OR4A17P-201ENST00000526032 904 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC130360.2-201ENST00000533477 1556 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 AL391156.1-201ENST00000554965 554 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC006530.1-201ENST00000555980 571 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC010735.1-201ENST00000567305 1026 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC005242.1-201ENST00000585658 438 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AL136131.3-201ENST00000607600 188 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC092106.3-201ENST00000611308 722 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 AL138960.1-201ENST00000613838 513 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC007786.3-201ENST00000615154 596 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms