Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 SNORA62.2-201ENST00000364672 152 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 RNU6-146P-201ENST00000384602 108 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC092642.1-201ENST00000392417 425 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC079809.1-201ENST00000415468 276 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC009965.2-201ENST00000425328 970 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 NPM1P24-201ENST00000428039 894 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 XKRY2-201ENST00000442362 1093 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC144530.1-201ENST00000452862 555 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 RN7SL369P-201ENST00000477138 299 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 MTND6P6-201ENST00000478031 263 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 OR7E157P-201ENST00000494376 911 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 LSM3P4-201ENST00000502948 309 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 OR7E99P-201ENST00000505750 922 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 RNU6-941P-201ENST00000516346 108 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 NPM1P6-201ENST00000521088 871 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 HAUS1P3-201ENST00000523909 662 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 RN7SL475P-201ENST00000583379 298 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC005332.4-201ENST00000592752 579 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC090948.2-201ENST00000607363 564 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AL133481.2-203ENST00000607558 139 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 WBP1LP8-201ENST00000617401 327 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC129778.1-202ENST00000623812 261 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC116563.2-201ENST00000624751 535 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC129915.3-201ENST00000634128 948 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AL591379.1-207ENST00000635982 261 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 AL451142.2-201ENST00000429076 2090 ntBASIC5.06□□□□□ -1.6
C11orf88Q6PI97 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C11orf88Q6PI97 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC093591.2-201ENST00000565254 3843 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 RN7SKP185-201ENST00000362813 326 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 RN7SKP74-201ENST00000362849 309 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 RN7SKP240-201ENST00000410583 375 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 PTCD2P2-201ENST00000415579 1095 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 MTND2P12-201ENST00000417560 1252 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC092570.3-201ENST00000420113 693 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 MARK2P12-201ENST00000420129 585 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 NMD3P2-201ENST00000421815 761 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 MTND4P24-201ENST00000424002 397 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 MTCO1P52-201ENST00000433928 531 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AL357520.1-201ENST00000441557 453 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 RPL12P24-201ENST00000474907 486 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 RPL12P31-201ENST00000478433 450 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms