Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC006499.4-201ENST00000510947 694 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 HMGB3P13-201ENST00000511263 607 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 EIF5A2P1-201ENST00000564027 460 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC083899.3-201ENST00000603413 594 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC087045.1-201ENST00000605856 382 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC004908.1-201ENST00000606572 541 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC005858.3-201ENST00000624756 589 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 MTND5P11-201ENST00000511037 1812 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AP003486.1-201ENST00000525716 3994 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.02□□□□□ -1.28
RNF43Q68DV7 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
RNF43Q68DV7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.28
RNF43Q68DV7 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
RNF43Q68DV7 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 ELF2P3-201ENST00000445099 1506 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AP000641.1-201ENST00000531988 1639 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 HSPD1P11-201ENST00000508643 1702 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC008033.1-201ENST00000216407 1162 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 SNORD56.4-201ENST00000363883 71 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AL512430.2-201ENST00000406786 339 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 RNA5SP115-201ENST00000411160 107 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 RPSAP40-201ENST00000442343 891 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC093166.3-201ENST00000448785 303 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 RPL31P20-201ENST00000449593 360 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC244505.3-201ENST00000454598 187 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 RPL12P7-201ENST00000493832 494 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC108941.1-201ENST00000502853 530 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC091874.2-201ENST00000505889 720 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC021220.1-201ENST00000507445 630 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC093816.1-201ENST00000515076 913 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 IGKV2D-38-201ENST00000518423 240 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 HIGD1AP18-201ENST00000520730 278 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AL591767.3-201ENST00000554632 525 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC093524.1-201ENST00000564266 1094 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC005730.3-201ENST00000583067 366 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AL117336.2-201ENST00000602435 335 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AL590032.1-201ENST00000604920 252 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 OR51C1P-201ENST00000608504 942 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 AL159169.3-201ENST00000608871 561 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 AC009704.2-201ENST00000618739 483 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms