Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC38Q502W7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC112503.2-201ENST00000609005 552 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AL445528.2-201ENST00000620582 470 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC145207.9-201ENST00000623802 325 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC38Q502W7 GNL2P1-201ENST00000451274 2190 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC117409.1-201ENST00000470499 1310 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC38Q502W7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 RN7SKP185-201ENST00000362813 326 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 RN7SKP74-201ENST00000362849 309 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 U3.7-201ENST00000363668 216 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 RN7SKP78-201ENST00000364711 318 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AL096711.1-201ENST00000404780 554 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 RPL35AP3-201ENST00000414680 288 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AL445928.1-201ENST00000435545 222 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 CYCSP11-201ENST00000436426 315 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC023271.1-201ENST00000445936 1090 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 RPS23P9-201ENST00000448848 438 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 RPL7P55-201ENST00000450522 746 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 CBX1P2-201ENST00000453841 458 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC122718.2-201ENST00000505325 591 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 IMPA1P1-201ENST00000510718 842 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC092332.1-201ENST00000563684 829 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 GARSP1-201ENST00000570895 719 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC006272.2-201ENST00000594725 163 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC024933.1-201ENST00000608472 348 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AL359091.2-201ENST00000609303 556 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC015712.7-201ENST00000615211 635 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AL136228.1-201ENST00000622221 319 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AL138955.1-201ENST00000622881 1040 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 AL683826.1-201ENST00000624104 627 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 FBXL21-201ENST00000297158 1305 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC38Q502W7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 HSPD1P9-201ENST00000420325 1636 ntBASIC5.96□□□□□ -1.46
CCDC38Q502W7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC38Q502W7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 RNU6-244P-201ENST00000391028 104 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 RNA5SP498-201ENST00000411342 120 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 RPS4XP5-201ENST00000419038 768 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC022022.1-201ENST00000430304 178 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 PNKDP1-201ENST00000435914 430 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 RBPJP7-201ENST00000442803 1447 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 RBPJP5-201ENST00000449433 1447 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms