Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SMG1P2-201ENST00000566127 4221 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 AL121657.1-201ENST00000327215 531 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX4Q06945 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 RNU6-560P-201ENST00000364007 108 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 Y_RNA.408-201ENST00000383987 102 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SOX4Q06945 AL391419.1-201ENST00000398901 1275 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 YWHAZP6-201ENST00000399764 738 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AL079342.2-201ENST00000403367 482 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.97□□□□□ -1.29
SOX4Q06945 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 TAF13P2-201ENST00000416876 286 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX4Q06945 OSTCP4-201ENST00000424397 449 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX4Q06945 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX4Q06945 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX4Q06945 TPT1P14-201ENST00000448018 505 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC003071.1-201ENST00000451219 789 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 RPL21P134-201ENST00000453468 483 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 AC118758.1-202ENST00000454719 225 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 SNRPGP9-201ENST00000456025 225 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 AMD1P1-201ENST00000457220 922 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX4Q06945 RPL7P18-201ENST00000478965 734 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 OR5H5P-201ENST00000503164 928 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX4Q06945 AC113367.2-201ENST00000505749 160 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX4Q06945 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX4Q06945 HSPE1P23-201ENST00000509838 286 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 RN7SKP141-201ENST00000516167 338 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX4Q06945 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX4Q06945 AC008055.1-201ENST00000547032 609 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX4Q06945 DPPA2P4-201ENST00000563717 878 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AL078601.3-201ENST00000573303 535 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC015818.6-201ENST00000584274 634 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX4Q06945 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 AL359704.2-201ENST00000604335 521 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC008945.2-201ENST00000606056 604 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC092954.2-201ENST00000609103 430 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AL135999.3-201ENST00000610501 812 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 MIR7109-201ENST00000613748 65 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX4Q06945 RMST_5.1-201ENST00000618704 126 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC099654.5-201ENST00000636479 350 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 AC099654.14-201ENST00000638599 341 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 MAPK10-365ENST00000641902 3825 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX4Q06945 AC000367.1-201ENST00000452711 1766 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 SAGE3P-201ENST00000619800 1635 ntBASIC6.97□□□□□ -1.29
SOX4Q06945 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX4Q06945 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX4Q06945 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SOX4Q06945 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX4Q06945 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX4Q06945 AC074141.1-201ENST00000588129 2995 ntBASIC6.96□□□□□ -1.29
SOX4Q06945 CTAGE11P-201ENST00000451540 2353 ntBASIC6.96□□□□□ -1.29
SOX4Q06945 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.96□□□□□ -1.29
SOX4Q06945 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX4Q06945 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SOX4Q06945 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SOX4Q06945 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
SOX4Q06945 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.96□□□□□ -1.29
SOX4Q06945 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.29
SOX4Q06945 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
SOX4Q06945 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX4Q06945 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 OR2M1P-201ENST00000318104 951 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SOX4Q06945 RNU6-931P-201ENST00000363850 107 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 RNU1-46P-201ENST00000384425 164 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 MIR188-201ENST00000385034 86 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms