Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RN7SKP224-201ENST00000364140 325 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 RN7SKP6-201ENST00000364795 319 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 RNA5SP131-201ENST00000365452 119 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 SNORA68.2-201ENST00000391263 128 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 GAPDHP42-201ENST00000406848 981 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 HMGN1P20-201ENST00000411849 300 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC007161.1-204ENST00000423039 460 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 CDY8P-201ENST00000428380 1279 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 KCTD9P1-201ENST00000430462 1167 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC090018.1-201ENST00000434369 367 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 DNAJA1P5-201ENST00000440278 943 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 EEF1B2P6-201ENST00000445713 673 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 CDY20P-201ENST00000447528 1279 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AL445665.1-202ENST00000452436 324 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC022795.1-201ENST00000473808 480 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 RN7SL741P-201ENST00000482473 289 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC011411.1-201ENST00000509592 876 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC109464.1-201ENST00000511091 819 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 HMGN1P9-201ENST00000515212 298 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 CYCSP22-201ENST00000517555 339 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC092709.1-201ENST00000521355 1045 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC024405.1-201ENST00000532521 1042 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 MTCYBP13-201ENST00000578634 1093 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC108738.1-201ENST00000603703 237 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC233280.2-201ENST00000603917 1070 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AP005431.1-201ENST00000618479 319 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 MIR193BHG-214ENST00000641765 509 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC073869.8-201ENST00000641806 335 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC008691.1-209ENST00000642094 814 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 MTCO1P22-201ENST00000604619 1360 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AC003973.3-201ENST00000624863 2822 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 SCARNA15-201ENST00000607520 4325 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 AL672167.1-204ENST00000641875 3017 ntBASIC4.09□□□□□ -1.75
HIST1H1AQ02539 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HIST1H1AQ02539 YES1P1-201ENST00000418510 1628 ntBASIC4.09□□□□□ -1.76
HIST1H1AQ02539 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HIST1H1AQ02539 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.09□□□□□ -1.76
HIST1H1AQ02539 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 RNU1-19P-201ENST00000363306 165 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 RNU4-2-201ENST00000365668 141 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AL672167.2-201ENST00000377164 879 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 Z68694.1-201ENST00000413929 841 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 EEF1B2P8-201ENST00000414101 671 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 RPS3P2-201ENST00000421346 701 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AL133173.1-201ENST00000423458 397 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC104843.2-201ENST00000427666 297 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 OR6D1P-201ENST00000436165 939 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC022133.1-201ENST00000490961 571 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 IGBP1P4-201ENST00000503202 879 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 MTND6P2-201ENST00000512226 524 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 EIF3KP3-201ENST00000514461 639 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 SCARNA16.4-201ENST00000516956 187 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 SCARNA20.4-201ENST00000516969 131 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC022360.1-201ENST00000521058 340 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 IGKV2-4-201ENST00000523070 340 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms