Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 U3.2-201ENST00000362981 210 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 NUDT19P3-201ENST00000404698 555 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 MIR1286-201ENST00000408112 78 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.72□□□□□ -1.65
H3F3AP84243 AC108075.1-201ENST00000424692 529 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 HSPE1P16-201ENST00000426640 348 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 OR52B5P-201ENST00000435337 951 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.72□□□□□ -1.65
H3F3AP84243 NOP56P2-201ENST00000447491 769 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 AC015864.1-201ENST00000496512 544 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 RPS4XP20-201ENST00000505751 772 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 AC098976.1-201ENST00000513014 541 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 AC092709.1-201ENST00000521355 1045 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.72□□□□□ -1.65
H3F3AP84243 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.72□□□□□ -1.65
H3F3AP84243 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.72□□□□□ -1.65
H3F3AP84243 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 AC008814.1-201ENST00000603797 406 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 AL512329.2-201ENST00000607350 548 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 AC109309.2-201ENST00000612597 332 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 MIR6839-201ENST00000620425 113 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.72□□□□□ -1.65
H3F3AP84243 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 OR52B5P-202ENST00000641118 1110 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.72□□□□□ -1.65
H3F3AP84243 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.72□□□□□ -1.65
H3F3AP84243 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3F3AP84243 AC006210.2-201ENST00000367074 1545 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 MTCO1P11-201ENST00000429111 1528 ntBASIC4.72□□□□□ -1.65
H3F3AP84243 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
H3F3AP84243 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.65
H3F3AP84243 AC092747.4-201ENST00000620519 1861 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.71□□□□□ -1.66
H3F3AP84243 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
H3F3AP84243 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H3F3AP84243 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.71□□□□□ -1.66
H3F3AP84243 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 U3.3-201ENST00000362986 216 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 SNORA51.1-201ENST00000363243 140 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 OR1L6-202ENST00000373684 1044 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.71□□□□□ -1.66
H3F3AP84243 SETP15-201ENST00000412724 337 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.71□□□□□ -1.66
H3F3AP84243 AC093827.1-201ENST00000480094 861 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 RPL7P41-201ENST00000485823 957 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 RN7SL814P-201ENST00000487715 300 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.71□□□□□ -1.66
H3F3AP84243 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3AP84243 AC006427.1-201ENST00000514359 712 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3AP84243 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3AP84243 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3AP84243 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3AP84243 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 MIR4489-201ENST00000578869 62 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 RN7SL753P-201ENST00000581238 290 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3AP84243 AC006272.2-201ENST00000594725 163 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 RNU6-84P-201ENST00000607737 102 ntBASIC4.71□□□□□ -1.66
H3F3AP84243 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.71□□□□□ -1.66
H3F3AP84243 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
H3F3AP84243 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
H3F3AP84243 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H3F3AP84243 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H3F3AP84243 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3AP84243 AC023421.1-201ENST00000590535 1785 ntBASIC4.7□□□□□ -1.66
H3F3AP84243 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
H3F3AP84243 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.7□□□□□ -1.66
H3F3AP84243 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms