Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SNORA70.9-201ENST00000384370 135 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 RN7SKP206-201ENST00000410823 293 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AL445213.1-201ENST00000412589 747 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC234064.1-201ENST00000436312 247 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 SETD6P1-201ENST00000444575 317 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AL929288.2-201ENST00000446368 407 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 COX4I1P2-201ENST00000447446 547 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AL139156.3-201ENST00000454802 394 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX6-1P78426 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 TRBV8-2-201ENST00000475637 270 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AC018645.1-201ENST00000505003 109 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC091515.1-201ENST00000548110 679 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AGGF1P6-201ENST00000569213 976 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC125494.2-201ENST00000602431 657 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 BUB1P1-201ENST00000603541 607 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 MTND3P19-201ENST00000603825 345 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AL359704.2-201ENST00000604335 521 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 BNIP3P4-201ENST00000604946 565 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 TUSC7.1-201ENST00000610969 165 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AC092106.3-201ENST00000611308 722 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC112694.2-201ENST00000623697 768 ntBASIC5.63□□□□□ -1.51
NKX6-1P78426 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.63□□□□□ -1.51
NKX6-1P78426 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NKX6-1P78426 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NKX6-1P78426 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX6-1P78426 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX6-1P78426 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NKX6-1P78426 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 AC138393.1-206ENST00000540997 1886 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX6-1P78426 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 AC022905.1-201ENST00000503430 3048 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
NKX6-1P78426 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX6-1P78426 RNU1-46P-201ENST00000384425 164 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 RNU6-225P-201ENST00000384613 103 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 AC003045.1-201ENST00000398779 713 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX6-1P78426 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX6-1P78426 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NKX6-1P78426 CYCSP52-201ENST00000422857 310 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX6-1P78426 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX6-1P78426 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX6-1P78426 AL451136.1-201ENST00000435399 325 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 AC009263.1-201ENST00000441193 1239 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX6-1P78426 AC007327.1-201ENST00000447461 264 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX6-1P78426 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.62□□□□□ -1.51
NKX6-1P78426 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.62□□□□□ -1.51
NKX6-1P78426 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX6-1P78426 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX6-1P78426 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms