Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RIPK4P57078 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RIPK4P57078 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RIPK4P57078 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.8□□□□□ -1.32
RIPK4P57078 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.8□□□□□ -1.32
RIPK4P57078 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.8□□□□□ -1.32
RIPK4P57078 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RIPK4P57078 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.8□□□□□ -1.32
RIPK4P57078 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RIPK4P57078 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
RIPK4P57078 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RIPK4P57078 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RIPK4P57078 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RIPK4P57078 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RIPK4P57078 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RIPK4P57078 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.79□□□□□ -1.32
RIPK4P57078 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RIPK4P57078 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RIPK4P57078 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RIPK4P57078 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RIPK4P57078 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.79□□□□□ -1.32
RIPK4P57078 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.79□□□□□ -1.32
RIPK4P57078 AC079809.1-201ENST00000415468 276 ntBASIC6.79□□□□□ -1.32
RIPK4P57078 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.79□□□□□ -1.32
RIPK4P57078 AC097484.1-201ENST00000471148 389 ntBASIC6.79□□□□□ -1.32
RIPK4P57078 AC020779.1-201ENST00000478757 796 ntBASIC6.79□□□□□ -1.32
RIPK4P57078 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RIPK4P57078 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.79□□□□□ -1.32
RIPK4P57078 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.79□□□□□ -1.32
RIPK4P57078 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.79□□□□□ -1.32
RIPK4P57078 AC007448.1-201ENST00000582714 234 ntBASIC6.79□□□□□ -1.32
RIPK4P57078 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.79□□□□□ -1.32
RIPK4P57078 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.79□□□□□ -1.32
RIPK4P57078 AP005432.2-201ENST00000608162 586 ntBASIC6.79□□□□□ -1.32
RIPK4P57078 AC138965.3-201ENST00000623875 498 ntBASIC6.79□□□□□ -1.32
RIPK4P57078 AC004656.1-201ENST00000568479 4951 ntBASIC6.79□□□□□ -1.32
RIPK4P57078 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RIPK4P57078 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RIPK4P57078 AC068870.3-201ENST00000625077 2536 ntBASIC6.79□□□□□ -1.32
RIPK4P57078 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
RIPK4P57078 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
RIPK4P57078 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.78□□□□□ -1.32
RIPK4P57078 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.78□□□□□ -1.32
RIPK4P57078 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RIPK4P57078 SNORA48.4-201ENST00000391089 134 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 RN7SKP213-201ENST00000410746 298 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 AL121878.1-201ENST00000418638 859 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 LYPLA1P1-201ENST00000434514 622 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.78□□□□□ -1.32
RIPK4P57078 AC004453.1-201ENST00000487895 408 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.78□□□□□ -1.32
RIPK4P57078 AC105420.1-201ENST00000504389 582 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RIPK4P57078 NPM1P21-201ENST00000513394 762 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.78□□□□□ -1.32
RIPK4P57078 RN7SKP66-201ENST00000516681 231 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.78□□□□□ -1.32
RIPK4P57078 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.78□□□□□ -1.32
RIPK4P57078 AC087763.1-201ENST00000603391 286 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 AL021707.7-201ENST00000607991 416 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RIPK4P57078 MIR7155-201ENST00000615925 56 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RIPK4P57078 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RIPK4P57078 AL603750.1-201ENST00000624216 1717 ntBASIC6.78□□□□□ -1.32
RIPK4P57078 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.78□□□□□ -1.32
RIPK4P57078 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RIPK4P57078 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.78□□□□□ -1.32
RIPK4P57078 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RIPK4P57078 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RIPK4P57078 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RIPK4P57078 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.32
RIPK4P57078 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RIPK4P57078 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RIPK4P57078 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RIPK4P57078 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.77□□□□□ -1.33
RIPK4P57078 SNURFL-201ENST00000309296 343 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 PSMD10P3-201ENST00000437000 448 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.77□□□□□ -1.33
RIPK4P57078 RPL7AP6-201ENST00000477943 801 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 AC109462.1-201ENST00000491087 368 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 AC147055.3-201ENST00000510547 851 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.77□□□□□ -1.33
RIPK4P57078 AC023389.2-201ENST00000580031 955 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.77□□□□□ -1.33
RIPK4P57078 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.77□□□□□ -1.33
RIPK4P57078 AC009163.6-201ENST00000612367 342 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 AL442128.2-201ENST00000620246 1824 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RIPK4P57078 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RIPK4P57078 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.77□□□□□ -1.33
RIPK4P57078 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms