Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR7973-1-201ENST00000614683 76 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 U6atac.1-201ENST00000616025 117 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 MIR7844-201ENST00000616161 122 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AC120057.5-201ENST00000623840 154 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GFRA1P56159 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GFRA1P56159 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GFRA1P56159 AL354702.2-202ENST00000641481 890 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA1P56159 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA1P56159 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 AC093278.2-201ENST00000564956 2485 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
GFRA1P56159 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 AC022819.1-201ENST00000563495 3910 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
GFRA1P56159 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 Y_RNA.6-201ENST00000362350 114 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 RNA5SP140-201ENST00000364524 92 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 U3.28-201ENST00000391249 210 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 DEFB108C-201ENST00000400154 252 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AL359694.1-201ENST00000403247 604 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AL590290.1-201ENST00000405336 380 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 RPL12P23-201ENST00000405880 490 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 FCF1P9-201ENST00000412546 282 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 AL596448.1-201ENST00000415024 392 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA1P56159 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 AC013403.1-201ENST00000436954 263 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AL031681.1-201ENST00000443304 400 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 IGBP1P3-201ENST00000447449 1000 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 NPM1P49-201ENST00000448027 714 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 AC093899.1-201ENST00000457984 376 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 RPS4XP12-201ENST00000461747 709 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC096741.1-201ENST00000472250 846 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AL355032.1-201ENST00000472981 438 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
GFRA1P56159 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 AC095057.1-201ENST00000507583 168 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 TCP11X3P-202ENST00000514289 1254 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA1P56159 AP001189.2-201ENST00000527320 189 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA1P56159 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA1P56159 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA1P56159 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 VN1R92P-201ENST00000598511 928 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC025594.3-201ENST00000613068 790 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC022306.2-201ENST00000617563 647 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA1P56159 MIR6503-201ENST00000622884 86 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC073348.1-201ENST00000623002 331 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 TSHZ2-205ENST00000626626 670 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
GFRA1P56159 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms