Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC023421.1-201ENST00000590535 1785 ntBASIC4.97□□□□□ -1.61
LIM2P55344 U3.2-201ENST00000362981 210 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AC007618.1-201ENST00000366455 732 ntBASIC4.97□□□□□ -1.61
LIM2P55344 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 MIR589-201ENST00000385238 99 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.97□□□□□ -1.61
LIM2P55344 COX5BP7-201ENST00000414780 274 ntBASIC4.97□□□□□ -1.61
LIM2P55344 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 HMGN2P27-201ENST00000427352 270 ntBASIC4.97□□□□□ -1.61
LIM2P55344 OR52B5P-201ENST00000435337 951 ntBASIC4.97□□□□□ -1.61
LIM2P55344 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.97□□□□□ -1.61
LIM2P55344 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.97□□□□□ -1.61
LIM2P55344 RN7SL814P-201ENST00000487715 300 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AP001960.1-201ENST00000506494 658 ntBASIC4.97□□□□□ -1.61
LIM2P55344 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.97□□□□□ -1.61
LIM2P55344 AC025423.2-201ENST00000537570 439 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AC127381.1-201ENST00000555979 939 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.97□□□□□ -1.61
LIM2P55344 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.97□□□□□ -1.61
LIM2P55344 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 AC002069.2-201ENST00000603580 883 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AC008814.1-201ENST00000603797 406 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AC087468.1-201ENST00000604365 630 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AC011626.1-201ENST00000604710 562 ntBASIC4.97□□□□□ -1.61
LIM2P55344 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 AC008833.1-201ENST00000611633 691 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.97□□□□□ -1.61
LIM2P55344 AC090527.3-201ENST00000619041 548 ntBASIC4.97□□□□□ -1.61
LIM2P55344 MIR6839-201ENST00000620425 113 ntBASIC4.97□□□□□ -1.61
LIM2P55344 AL355480.1-201ENST00000629041 99 ntBASIC4.97□□□□□ -1.61
LIM2P55344 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.97□□□□□ -1.61
LIM2P55344 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 OR52B5P-202ENST00000641118 1110 ntBASIC4.97□□□□□ -1.61
LIM2P55344 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
LIM2P55344 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.97□□□□□ -1.61
LIM2P55344 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIM2P55344 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LIM2P55344 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.96□□□□□ -1.61
LIM2P55344 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIM2P55344 AC011755.1-201ENST00000623763 2049 ntBASIC4.96□□□□□ -1.62
LIM2P55344 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LIM2P55344 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIM2P55344 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIM2P55344 U3.23-201ENST00000391132 200 ntBASIC4.96□□□□□ -1.62
LIM2P55344 OR8V1P-201ENST00000395193 873 ntBASIC4.96□□□□□ -1.62
LIM2P55344 NACAP7-201ENST00000407371 609 ntBASIC4.96□□□□□ -1.62
LIM2P55344 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.96□□□□□ -1.62
LIM2P55344 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIM2P55344 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.96□□□□□ -1.62
LIM2P55344 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.96□□□□□ -1.62
LIM2P55344 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.96□□□□□ -1.62
LIM2P55344 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.96□□□□□ -1.62
LIM2P55344 Z92846.1-201ENST00000456203 268 ntBASIC4.96□□□□□ -1.62
LIM2P55344 AC002075.1-201ENST00000457396 676 ntBASIC4.96□□□□□ -1.62
LIM2P55344 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.96□□□□□ -1.62
LIM2P55344 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
LIM2P55344 AC006427.1-201ENST00000514359 712 ntBASIC4.96□□□□□ -1.62
LIM2P55344 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.96□□□□□ -1.62
LIM2P55344 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.96□□□□□ -1.62
LIM2P55344 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.96□□□□□ -1.62
LIM2P55344 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.96□□□□□ -1.62
LIM2P55344 RN7SL708P-201ENST00000580952 299 ntBASIC4.96□□□□□ -1.62
LIM2P55344 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.96□□□□□ -1.62
LIM2P55344 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.96□□□□□ -1.62
LIM2P55344 MIR6826-201ENST00000617808 98 ntBASIC4.96□□□□□ -1.62
LIM2P55344 AC004808.2-201ENST00000627965 773 ntBASIC4.96□□□□□ -1.62
LIM2P55344 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIM2P55344 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIM2P55344 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIM2P55344 AC012078.1-201ENST00000405035 1646 ntBASIC4.96□□□□□ -1.62
LIM2P55344 AC116158.1-201ENST00000560231 2129 ntBASIC4.96□□□□□ -1.62
LIM2P55344 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.96□□□□□ -1.62
LIM2P55344 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LIM2P55344 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
LIM2P55344 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIM2P55344 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.95□□□□□ -1.62
LIM2P55344 PABPC1P6-201ENST00000445594 1829 ntBASIC4.95□□□□□ -1.62
LIM2P55344 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIM2P55344 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.95□□□□□ -1.62
LIM2P55344 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LIM2P55344 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.95□□□□□ -1.62
LIM2P55344 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.95□□□□□ -1.62
LIM2P55344 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIM2P55344 MTCO1P22-201ENST00000604619 1360 ntBASIC4.95□□□□□ -1.62
LIM2P55344 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.95□□□□□ -1.62
LIM2P55344 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.95□□□□□ -1.62
LIM2P55344 U3.3-201ENST00000362986 216 ntBASIC4.95□□□□□ -1.62
LIM2P55344 RNA5SP90-201ENST00000364801 99 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms