Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 AC004158.1-201ENST00000564508 4319 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 RN7SKP185-201ENST00000362813 326 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 AL353625.1-202ENST00000366273 571 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 SNORA70.6-201ENST00000383934 134 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 MIR765-201ENST00000390226 114 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 RN7SKP273-201ENST00000411392 314 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.61□□□□□ -1.51
ATXN3P54252 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.61□□□□□ -1.51
ATXN3P54252 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.61□□□□□ -1.51
ATXN3P54252 RBMY2TP-201ENST00000451162 947 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 AP000547.1-201ENST00000454360 617 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.61□□□□□ -1.51
ATXN3P54252 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.61□□□□□ -1.51
ATXN3P54252 AL157777.1-201ENST00000468100 304 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 CBX1P5-201ENST00000475330 559 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.61□□□□□ -1.51
ATXN3P54252 CCNHP1-201ENST00000513311 678 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.61□□□□□ -1.51
ATXN3P54252 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.61□□□□□ -1.51
ATXN3P54252 AL358913.1-201ENST00000554342 121 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.61□□□□□ -1.51
ATXN3P54252 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.61□□□□□ -1.51
ATXN3P54252 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.61□□□□□ -1.51
ATXN3P54252 AC087763.1-201ENST00000603391 286 ntBASIC5.61□□□□□ -1.51
ATXN3P54252 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.61□□□□□ -1.51
ATXN3P54252 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATXN3P54252 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ATXN3P54252 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.6□□□□□ -1.51
ATXN3P54252 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.6□□□□□ -1.51
ATXN3P54252 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.6□□□□□ -1.51
ATXN3P54252 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATXN3P54252 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.6□□□□□ -1.51
ATXN3P54252 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATXN3P54252 AC003985.2-201ENST00000562268 1669 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.6□□□□□ -1.51
ATXN3P54252 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 RPL23P2-201ENST00000320371 421 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATXN3P54252 MIR133A2-201ENST00000347538 102 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 RNA5SP234-201ENST00000363916 119 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 AL589647.1-201ENST00000402485 466 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 AL158827.1-201ENST00000416300 391 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.6□□□□□ -1.51
ATXN3P54252 AC009506.2-201ENST00000420635 840 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.6□□□□□ -1.51
ATXN3P54252 CRIP1P1-201ENST00000427567 185 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.6□□□□□ -1.51
ATXN3P54252 H2AFZP6-201ENST00000444403 394 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 MTND4LP12-201ENST00000448237 295 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 RPS23P9-201ENST00000448848 438 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.6□□□□□ -1.51
ATXN3P54252 RN7SL447P-201ENST00000494711 245 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.6□□□□□ -1.51
ATXN3P54252 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.6□□□□□ -1.51
ATXN3P54252 AC139365.2-201ENST00000517972 253 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.6□□□□□ -1.51
ATXN3P54252 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.6□□□□□ -1.51
ATXN3P54252 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.6□□□□□ -1.51
ATXN3P54252 MIR4646-201ENST00000580775 63 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.6□□□□□ -1.51
ATXN3P54252 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.6□□□□□ -1.51
ATXN3P54252 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.6□□□□□ -1.51
ATXN3P54252 AL049539.1-201ENST00000611964 459 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 AP002505.2-201ENST00000623585 696 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 AC007938.2-201ENST00000604666 2634 ntBASIC5.6□□□□□ -1.51
ATXN3P54252 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.6□□□□□ -1.51
ATXN3P54252 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATXN3P54252 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
ATXN3P54252 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ATXN3P54252 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATXN3P54252 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ATXN3P54252 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATXN3P54252 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.59□□□□□ -1.51
ATXN3P54252 SNORA5.1-201ENST00000384275 131 ntBASIC5.59□□□□□ -1.51
ATXN3P54252 RNU6-1263P-201ENST00000384601 106 ntBASIC5.59□□□□□ -1.51
ATXN3P54252 RNU6-1320P-201ENST00000390838 107 ntBASIC5.59□□□□□ -1.51
ATXN3P54252 RNU6-1269P-201ENST00000391139 107 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms