Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC126177.5-201ENST00000549599 178 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 MIR4330-201ENST00000579077 105 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 AC011840.5-201ENST00000582125 771 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK1P53667 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK1P53667 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.62□□□□□ -1.51
LIMK1P53667 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 AP003499.2-201ENST00000624100 483 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
LIMK1P53667 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.61□□□□□ -1.51
LIMK1P53667 AC010132.2-201ENST00000295493 1043 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AL159987.1-201ENST00000347911 293 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LIMK1P53667 RNA5SP453-201ENST00000362503 119 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 RNU6-618P-201ENST00000363518 112 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK1P53667 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.61□□□□□ -1.51
LIMK1P53667 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK1P53667 AC245028.1-201ENST00000423259 256 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 HSPA8P17-201ENST00000427029 1382 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.61□□□□□ -1.51
LIMK1P53667 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.61□□□□□ -1.51
LIMK1P53667 AL589765.3-201ENST00000446084 462 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 TPT1P13-201ENST00000449760 499 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 RPS26P41-201ENST00000450370 284 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 MTND3P4-201ENST00000453537 303 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.61□□□□□ -1.51
LIMK1P53667 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AC073594.1-201ENST00000462065 364 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 RN7SL570P-201ENST00000484405 292 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 RPL23AP40-201ENST00000487630 390 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK1P53667 SNRPCP2-201ENST00000504370 475 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.61□□□□□ -1.51
LIMK1P53667 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.61□□□□□ -1.51
LIMK1P53667 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.61□□□□□ -1.51
LIMK1P53667 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.61□□□□□ -1.51
LIMK1P53667 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.61□□□□□ -1.51
LIMK1P53667 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.61□□□□□ -1.51
LIMK1P53667 PCNPP1-201ENST00000552501 511 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AL390334.1-201ENST00000556395 450 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.61□□□□□ -1.51
LIMK1P53667 AC074050.1-201ENST00000563247 211 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 MRPS21P7-201ENST00000566937 238 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.61□□□□□ -1.51
LIMK1P53667 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.61□□□□□ -1.51
LIMK1P53667 MIR4480-201ENST00000582492 71 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AP000473.2-201ENST00000602659 1537 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AC006363.1-201ENST00000603806 463 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 BX322635.1-201ENST00000605804 496 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK1P53667 AC104820.1-201ENST00000624183 307 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AC003992.1-201ENST00000635364 557 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 AL139254.3-201ENST00000641097 674 ntBASIC5.61□□□□□ -1.51
LIMK1P53667 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
LIMK1P53667 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
LIMK1P53667 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK1P53667 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK1P53667 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LIMK1P53667 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC016745.2-201ENST00000608834 3443 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK1P53667 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC012618.3-205ENST00000637896 1496 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK1P53667 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK1P53667 MIR133A2-201ENST00000347538 102 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 RN7SKP28-201ENST00000364770 305 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 AL607077.1-201ENST00000401718 499 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LIMK1P53667 AL390774.1-201ENST00000411924 246 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC019205.1-201ENST00000421830 730 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 NPM1P18-201ENST00000434232 732 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC019185.1-201ENST00000442718 389 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.6□□□□□ -1.51
LIMK1P53667 DNAJB5P1-201ENST00000454004 806 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK1P53667 RPL32P33-201ENST00000487023 394 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 RN7SL447P-201ENST00000494711 245 ntBASIC5.6□□□□□ -1.51
LIMK1P53667 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.6□□□□□ -1.51
LIMK1P53667 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms