Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLCNKAP51800 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLCNKAP51800 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AC087565.3-202ENST00000642085 1603 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 RNA5SP319-201ENST00000362768 119 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 AL391361.1-201ENST00000405580 489 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AC098592.2-201ENST00000413158 265 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AC007161.1-204ENST00000423039 460 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC100832.1-201ENST00000471945 383 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 RN7SL184P-201ENST00000488308 297 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC090638.1-201ENST00000498296 909 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 BX510359.5-201ENST00000515651 304 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCNKAP51800 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC134349.2-201ENST00000535136 910 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AC090022.1-201ENST00000546569 311 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC079395.2-201ENST00000610982 737 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AC007204.2-201ENST00000615022 616 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AC074276.2-201ENST00000619891 348 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 MIR8080-201ENST00000622224 89 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.46□□□□□ -1.54
CLCNKAP51800 AC104964.3-201ENST00000606115 2860 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 TTC39DP-201ENST00000416781 1688 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 MT-RNR2-201ENST00000387347 1559 ntBASIC5.46□□□□□ -1.54
CLCNKAP51800 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCNKAP51800 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCNKAP51800 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
CLCNKAP51800 AC107021.2-201ENST00000567714 2095 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLCNKAP51800 AL121886.1-201ENST00000358609 435 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 RN7SKP162-201ENST00000363605 345 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLCNKAP51800 GAPDHP15-201ENST00000398586 975 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 AMZ2P2-201ENST00000406819 1057 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 SEPT7P8-201ENST00000413308 775 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 OR10T1P-201ENST00000424327 947 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.45□□□□□ -1.54
CLCNKAP51800 SCAND3P1-201ENST00000439854 1060 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCNKAP51800 TXNP2-201ENST00000443918 295 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 RPL35AP19-201ENST00000469425 329 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCNKAP51800 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.45□□□□□ -1.54
CLCNKAP51800 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.45□□□□□ -1.54
CLCNKAP51800 RN7SKP253-201ENST00000516424 309 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 SEC11B-201ENST00000518383 499 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 AP000859.1-201ENST00000525536 307 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 AC074029.2-201ENST00000551045 634 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.45□□□□□ -1.54
CLCNKAP51800 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
CLCNKAP51800 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCNKAP51800 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCNKAP51800 BNIP3P39-201ENST00000601077 554 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 AC006249.1-201ENST00000621223 471 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.45□□□□□ -1.54
CLCNKAP51800 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.45□□□□□ -1.54
CLCNKAP51800 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCNKAP51800 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 AC138907.8-201ENST00000623981 2256 ntBASIC5.45□□□□□ -1.54
CLCNKAP51800 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCNKAP51800 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCNKAP51800 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms