Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.95□□□□□ -1.62
RFC3P40938 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.95□□□□□ -1.62
RFC3P40938 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 AC005294.1-201ENST00000355509 281 ntBASIC4.95□□□□□ -1.62
RFC3P40938 RNA5SP183-201ENST00000362452 119 ntBASIC4.95□□□□□ -1.62
RFC3P40938 U3.2-201ENST00000362981 210 ntBASIC4.95□□□□□ -1.62
RFC3P40938 RN7SKP145-201ENST00000363291 303 ntBASIC4.95□□□□□ -1.62
RFC3P40938 RNU1-149P-201ENST00000390870 161 ntBASIC4.95□□□□□ -1.62
RFC3P40938 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
RFC3P40938 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 PRUNEP1-201ENST00000425846 705 ntBASIC4.95□□□□□ -1.62
RFC3P40938 RPL7P56-201ENST00000429441 717 ntBASIC4.95□□□□□ -1.62
RFC3P40938 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.95□□□□□ -1.62
RFC3P40938 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.95□□□□□ -1.62
RFC3P40938 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.95□□□□□ -1.62
RFC3P40938 NDUFA5P12-201ENST00000503796 343 ntBASIC4.95□□□□□ -1.62
RFC3P40938 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.95□□□□□ -1.62
RFC3P40938 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RFC3P40938 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.95□□□□□ -1.62
RFC3P40938 H3F3BP2-201ENST00000583907 357 ntBASIC4.95□□□□□ -1.62
RFC3P40938 AC007786.3-201ENST00000615154 596 ntBASIC4.95□□□□□ -1.62
RFC3P40938 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.95□□□□□ -1.62
RFC3P40938 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.95□□□□□ -1.62
RFC3P40938 AP005432.1-201ENST00000580891 3485 ntBASIC4.95□□□□□ -1.62
RFC3P40938 AC027279.1-201ENST00000568885 4284 ntBASIC4.94□□□□□ -1.62
RFC3P40938 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.94□□□□□ -1.62
RFC3P40938 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.94□□□□□ -1.62
RFC3P40938 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 THAP12P5-201ENST00000405864 2275 ntBASIC4.94□□□□□ -1.62
RFC3P40938 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RFC3P40938 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.94□□□□□ -1.62
RFC3P40938 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RFC3P40938 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.94□□□□□ -1.62
RFC3P40938 RNA5SP507-201ENST00000363603 121 ntBASIC4.94□□□□□ -1.62
RFC3P40938 RNU1-43P-201ENST00000365052 165 ntBASIC4.94□□□□□ -1.62
RFC3P40938 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.94□□□□□ -1.62
RFC3P40938 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RFC3P40938 SNORA81-201ENST00000408493 178 ntBASIC4.94□□□□□ -1.62
RFC3P40938 RN7SKP279-201ENST00000411383 298 ntBASIC4.94□□□□□ -1.62
RFC3P40938 METTL15P3-201ENST00000415522 1221 ntBASIC4.94□□□□□ -1.62
RFC3P40938 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.94□□□□□ -1.62
RFC3P40938 GAPDHP58-201ENST00000438477 1006 ntBASIC4.94□□□□□ -1.62
RFC3P40938 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.94□□□□□ -1.62
RFC3P40938 TCEA1P3-201ENST00000443005 880 ntBASIC4.94□□□□□ -1.62
RFC3P40938 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.94□□□□□ -1.62
RFC3P40938 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.94□□□□□ -1.62
RFC3P40938 CBX1P2-201ENST00000453841 458 ntBASIC4.94□□□□□ -1.62
RFC3P40938 RPL5P22-201ENST00000480199 884 ntBASIC4.94□□□□□ -1.62
RFC3P40938 ATP5LP5-201ENST00000483050 299 ntBASIC4.94□□□□□ -1.62
RFC3P40938 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.94□□□□□ -1.62
RFC3P40938 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.94□□□□□ -1.62
RFC3P40938 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.94□□□□□ -1.62
RFC3P40938 GLUD1P3-202ENST00000508551 200 ntBASIC4.94□□□□□ -1.62
RFC3P40938 AC147055.3-201ENST00000510547 851 ntBASIC4.94□□□□□ -1.62
RFC3P40938 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.94□□□□□ -1.62
RFC3P40938 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RFC3P40938 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.94□□□□□ -1.62
RFC3P40938 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.94□□□□□ -1.62
RFC3P40938 AC015849.6-201ENST00000605454 474 ntBASIC4.94□□□□□ -1.62
RFC3P40938 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RFC3P40938 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
RFC3P40938 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFC3P40938 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 OR4F13P-202ENST00000560066 2054 ntBASIC4.93□□□□□ -1.62
RFC3P40938 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 AC009962.1-201ENST00000567327 3813 ntBASIC4.93□□□□□ -1.62
RFC3P40938 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.93□□□□□ -1.62
RFC3P40938 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RFC3P40938 MTHFD2P5-201ENST00000320415 844 ntBASIC4.93□□□□□ -1.62
RFC3P40938 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms