Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.85□□□□□ -1.47
PBX3P40426 MTND5P23-201ENST00000430812 1655 ntBASIC5.85□□□□□ -1.47
PBX3P40426 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PBX3P40426 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PBX3P40426 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PBX3P40426 KYNUP3-201ENST00000574386 1341 ntBASIC5.85□□□□□ -1.47
PBX3P40426 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.85□□□□□ -1.47
PBX3P40426 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PBX3P40426 RNA5SP443-201ENST00000363083 132 ntBASIC5.85□□□□□ -1.47
PBX3P40426 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PBX3P40426 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.85□□□□□ -1.47
PBX3P40426 AL109941.1-201ENST00000401925 229 ntBASIC5.85□□□□□ -1.47
PBX3P40426 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.85□□□□□ -1.47
PBX3P40426 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.85□□□□□ -1.47
PBX3P40426 RNGTTP1-201ENST00000420965 728 ntBASIC5.85□□□□□ -1.47
PBX3P40426 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.85□□□□□ -1.47
PBX3P40426 TMEM183AP1-205ENST00000432739 290 ntBASIC5.85□□□□□ -1.47
PBX3P40426 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.85□□□□□ -1.47
PBX3P40426 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.85□□□□□ -1.47
PBX3P40426 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.85□□□□□ -1.47
PBX3P40426 MTND6P2-201ENST00000512226 524 ntBASIC5.85□□□□□ -1.47
PBX3P40426 RN7SKP253-201ENST00000516424 309 ntBASIC5.85□□□□□ -1.47
PBX3P40426 SCARNA16.4-201ENST00000516956 187 ntBASIC5.85□□□□□ -1.47
PBX3P40426 PMS2P3-207ENST00000529061 717 ntBASIC5.85□□□□□ -1.47
PBX3P40426 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.85□□□□□ -1.47
PBX3P40426 AP004607.2-201ENST00000533949 322 ntBASIC5.85□□□□□ -1.47
PBX3P40426 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.85□□□□□ -1.47
PBX3P40426 AC060780.2-201ENST00000589047 198 ntBASIC5.85□□□□□ -1.47
PBX3P40426 MIMT1-201ENST00000597105 1050 ntBASIC5.85□□□□□ -1.47
PBX3P40426 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
PBX3P40426 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.85□□□□□ -1.47
PBX3P40426 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.85□□□□□ -1.47
PBX3P40426 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PBX3P40426 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PBX3P40426 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PBX3P40426 OR55B1P-203ENST00000641518 2602 ntBASIC5.85□□□□□ -1.47
PBX3P40426 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.85□□□□□ -1.47
PBX3P40426 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PBX3P40426 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PBX3P40426 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
PBX3P40426 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PBX3P40426 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
PBX3P40426 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PBX3P40426 RN7SKP115-201ENST00000363177 317 ntBASIC5.84□□□□□ -1.47
PBX3P40426 RNU6-1251P-201ENST00000364502 107 ntBASIC5.84□□□□□ -1.47
PBX3P40426 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.84□□□□□ -1.47
PBX3P40426 RPS26P13-201ENST00000419030 330 ntBASIC5.84□□□□□ -1.47
PBX3P40426 AL590399.2-201ENST00000427536 309 ntBASIC5.84□□□□□ -1.47
PBX3P40426 MTND4P15-201ENST00000437913 1033 ntBASIC5.84□□□□□ -1.47
PBX3P40426 NANOGP9-201ENST00000439890 892 ntBASIC5.84□□□□□ -1.47
PBX3P40426 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.84□□□□□ -1.47
PBX3P40426 Z99127.2-201ENST00000441426 334 ntBASIC5.84□□□□□ -1.47
PBX3P40426 AC073850.1-201ENST00000449243 255 ntBASIC5.84□□□□□ -1.47
PBX3P40426 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 AC104629.2-201ENST00000468627 598 ntBASIC5.84□□□□□ -1.47
PBX3P40426 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.84□□□□□ -1.47
PBX3P40426 RN7SL97P-201ENST00000486780 299 ntBASIC5.84□□□□□ -1.47
PBX3P40426 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.84□□□□□ -1.47
PBX3P40426 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.84□□□□□ -1.47
PBX3P40426 SNRPCP2-201ENST00000504370 475 ntBASIC5.84□□□□□ -1.47
PBX3P40426 NDUFB5P1-201ENST00000508134 564 ntBASIC5.84□□□□□ -1.47
PBX3P40426 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.84□□□□□ -1.47
PBX3P40426 SNORA26.10-201ENST00000516427 141 ntBASIC5.84□□□□□ -1.47
PBX3P40426 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.84□□□□□ -1.47
PBX3P40426 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.84□□□□□ -1.47
PBX3P40426 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.84□□□□□ -1.47
PBX3P40426 AC137627.1-201ENST00000545761 289 ntBASIC5.84□□□□□ -1.47
PBX3P40426 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.84□□□□□ -1.47
PBX3P40426 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.84□□□□□ -1.47
PBX3P40426 NMNAT1P5-201ENST00000559657 841 ntBASIC5.84□□□□□ -1.47
PBX3P40426 LINC00557-201ENST00000563184 1279 ntBASIC5.84□□□□□ -1.47
PBX3P40426 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.84□□□□□ -1.47
PBX3P40426 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.84□□□□□ -1.47
PBX3P40426 AC067838.1-201ENST00000606064 577 ntBASIC5.84□□□□□ -1.47
PBX3P40426 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 AC009163.6-201ENST00000612367 342 ntBASIC5.84□□□□□ -1.47
PBX3P40426 AC100827.5-201ENST00000615883 426 ntBASIC5.84□□□□□ -1.47
PBX3P40426 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 AP001784.1-201ENST00000624107 428 ntBASIC5.84□□□□□ -1.47
PBX3P40426 LINC01739-205ENST00000641890 573 ntBASIC5.84□□□□□ -1.47
PBX3P40426 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PBX3P40426 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.84□□□□□ -1.47
PBX3P40426 AC007938.2-201ENST00000604666 2634 ntBASIC5.84□□□□□ -1.47
PBX3P40426 AC239868.2-201ENST00000564237 4527 ntBASIC5.84□□□□□ -1.47
PBX3P40426 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.84□□□□□ -1.48
PBX3P40426 ZNF733P-202ENST00000444809 1573 ntBASIC5.84□□□□□ -1.48
PBX3P40426 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PBX3P40426 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
PBX3P40426 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.83□□□□□ -1.48
PBX3P40426 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.83□□□□□ -1.48
PBX3P40426 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms