Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RN7SL591P-201ENST00000496150 292 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC8P31273 GTF2F2P1-201ENST00000511083 675 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC8P31273 AP000619.2-201ENST00000546014 969 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 HNRNPCP1-201ENST00000556181 766 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC8P31273 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC8P31273 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC8P31273 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 AC005252.1-201ENST00000604518 1063 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AC009597.2-201ENST00000604659 592 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AP005131.7-201ENST00000610087 611 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 AC015712.7-201ENST00000615211 635 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AC112694.2-201ENST00000623697 768 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AP002512.4-202ENST00000641599 4530 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC8P31273 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HOXC8P31273 INTS6P1-201ENST00000504674 2530 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HOXC8P31273 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC8P31273 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HOXC8P31273 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC8P31273 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC8P31273 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HOXC8P31273 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 TTC41P-205ENST00000551270 3963 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 AC100757.1-201ENST00000616872 1835 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HOXC8P31273 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC8P31273 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HOXC8P31273 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC8P31273 MIR105-1-201ENST00000385222 81 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC8P31273 Y_RNA.625-201ENST00000411256 107 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 RPL37P18-201ENST00000411602 243 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.84□□□□□ -1.47
HOXC8P31273 RPL23AP18-201ENST00000416139 468 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 PTP4A1P1-201ENST00000420539 515 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 RCC2P2-201ENST00000422174 918 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 DDX39BP1-205ENST00000422507 192 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC8P31273 AL138787.1-202ENST00000437804 898 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC8P31273 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC8P31273 AC108161.1-201ENST00000461060 402 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AC098583.1-201ENST00000480875 255 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.84□□□□□ -1.47
HOXC8P31273 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.84□□□□□ -1.47
HOXC8P31273 EIF3KP3-201ENST00000514461 639 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AP002981.1-201ENST00000517692 975 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.84□□□□□ -1.47
HOXC8P31273 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 AC005000.1-201ENST00000536192 288 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC8P31273 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC8P31273 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 AL390726.5-202ENST00000564800 256 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.84□□□□□ -1.47
HOXC8P31273 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.84□□□□□ -1.47
HOXC8P31273 AC125494.2-201ENST00000602431 657 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AC093799.2-201ENST00000610062 578 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 MIR6798-201ENST00000612887 67 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AL627230.1-201ENST00000613077 211 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AL118556.2-201ENST00000614375 824 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AL591926.8-201ENST00000616876 211 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 AP003400.3-201ENST00000624904 346 ntBASIC5.84□□□□□ -1.47
HOXC8P31273 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HOXC8P31273 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC8P31273 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC8P31273 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HOXC8P31273 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
HOXC8P31273 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HOXC8P31273 CDC27P2-201ENST00000425026 1922 ntBASIC5.84□□□□□ -1.48
HOXC8P31273 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC8P31273 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC8P31273 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HOXC8P31273 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms