Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC108693.1-201ENST00000496068 432 ntBASIC4.89□□□□□ -1.63
SHC1P29353 RPEP1-201ENST00000504507 658 ntBASIC4.89□□□□□ -1.63
SHC1P29353 RPL7L1P4-201ENST00000513004 707 ntBASIC4.89□□□□□ -1.63
SHC1P29353 ATP5LP3-201ENST00000514223 304 ntBASIC4.89□□□□□ -1.63
SHC1P29353 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.89□□□□□ -1.63
SHC1P29353 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.89□□□□□ -1.63
SHC1P29353 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.89□□□□□ -1.63
SHC1P29353 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
SHC1P29353 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.89□□□□□ -1.63
SHC1P29353 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 AC106730.2-201ENST00000566641 540 ntBASIC4.89□□□□□ -1.63
SHC1P29353 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 AC016839.1-201ENST00000578162 867 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AC010615.3-201ENST00000597319 394 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.89□□□□□ -1.63
SHC1P29353 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 MIR6768-201ENST00000610734 72 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AC003001.2-201ENST00000616294 831 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.89□□□□□ -1.63
SHC1P29353 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.89□□□□□ -1.63
SHC1P29353 AC106730.3-201ENST00000624568 641 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AC136428.4-201ENST00000634254 1155 ntBASIC4.89□□□□□ -1.63
SHC1P29353 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SHC1P29353 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 AC093849.1-201ENST00000563631 2209 ntBASIC4.89□□□□□ -1.63
SHC1P29353 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHC1P29353 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHC1P29353 AC100757.1-201ENST00000616872 1835 ntBASIC4.88□□□□□ -1.63
SHC1P29353 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
SHC1P29353 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHC1P29353 OR5T3-201ENST00000303059 1023 ntBASIC4.88□□□□□ -1.63
SHC1P29353 RN7SKP162-201ENST00000363605 345 ntBASIC4.88□□□□□ -1.63
SHC1P29353 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 MIR323B-201ENST00000385269 82 ntBASIC4.88□□□□□ -1.63
SHC1P29353 MIR143-201ENST00000385300 106 ntBASIC4.88□□□□□ -1.63
SHC1P29353 SNORA40.4-201ENST00000390971 128 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AL391361.1-201ENST00000405580 489 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AL390774.1-201ENST00000411924 246 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 AC013470.3-201ENST00000420252 1194 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.88□□□□□ -1.63
SHC1P29353 MTATP6P11-201ENST00000428071 670 ntBASIC4.88□□□□□ -1.63
SHC1P29353 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 CFL1P1-202ENST00000432948 411 ntBASIC4.88□□□□□ -1.63
SHC1P29353 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.88□□□□□ -1.63
SHC1P29353 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.88□□□□□ -1.63
SHC1P29353 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.88□□□□□ -1.63
SHC1P29353 TCEA1P3-201ENST00000443005 880 ntBASIC4.88□□□□□ -1.63
SHC1P29353 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.88□□□□□ -1.63
SHC1P29353 MTND2P3-201ENST00000452458 470 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.88□□□□□ -1.63
SHC1P29353 AL133445.1-201ENST00000467051 452 ntBASIC4.88□□□□□ -1.63
SHC1P29353 RPS26P39-201ENST00000469206 341 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.88□□□□□ -1.63
SHC1P29353 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.88□□□□□ -1.63
SHC1P29353 AC098976.1-201ENST00000513014 541 ntBASIC4.88□□□□□ -1.63
SHC1P29353 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.88□□□□□ -1.63
SHC1P29353 SCARNA16.4-201ENST00000516956 187 ntBASIC4.88□□□□□ -1.63
SHC1P29353 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.88□□□□□ -1.63
SHC1P29353 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 AC126177.5-201ENST00000549599 178 ntBASIC4.88□□□□□ -1.63
SHC1P29353 LSM3P2-201ENST00000551246 273 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 RN7SL753P-201ENST00000581238 290 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.88□□□□□ -1.63
SHC1P29353 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.88□□□□□ -1.63
SHC1P29353 AC108738.1-201ENST00000603703 237 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AL356608.1-201ENST00000610034 820 ntBASIC4.88□□□□□ -1.63
SHC1P29353 AC022467.1-201ENST00000614738 749 ntBASIC4.88□□□□□ -1.63
SHC1P29353 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHC1P29353 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SHC1P29353 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SHC1P29353 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHC1P29353 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHC1P29353 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
SHC1P29353 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHC1P29353 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHC1P29353 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms