Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC100757.1-201ENST00000616872 1835 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 PPIAP9-201ENST00000403866 498 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AL513325.1-201ENST00000417716 1034 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC009784.1-201ENST00000426484 460 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC022022.1-201ENST00000430304 178 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 Z85994.2-201ENST00000434327 452 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 TPTE2P1-204ENST00000435256 593 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 MTND2P40-201ENST00000436718 841 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 NPM1P39-201ENST00000449818 867 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AL672138.1-201ENST00000450604 1015 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC023141.9-201ENST00000458734 412 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC093827.1-201ENST00000480094 861 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 ATG10-AS1-201ENST00000504846 648 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC011411.1-201ENST00000509592 876 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC109464.1-201ENST00000511091 819 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 SEPT10P1-201ENST00000517342 1162 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AP005403.1-201ENST00000579720 229 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 SNORD95-201ENST00000579879 68 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC020915.5-201ENST00000596836 964 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AL122125.1-201ENST00000616999 600 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 MIR6729-201ENST00000618194 65 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 TRIM51GP-201ENST00000534741 1350 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 AC016745.2-201ENST00000608834 3443 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 RNU6-618P-201ENST00000363518 112 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 SNORD65-201ENST00000391079 73 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL034403.1-201ENST00000399414 885 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 RPL23AP4-201ENST00000427757 463 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 RPS27AP6-201ENST00000427962 448 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AP000936.3-201ENST00000438127 255 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL591363.1-201ENST00000450091 483 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AC007386.1-201ENST00000455212 582 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL136038.1-201ENST00000497246 351 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 RN7SKP99-201ENST00000517028 307 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AC078878.1-201ENST00000539832 958 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AC104695.2-201ENST00000605056 775 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AC010632.3-201ENST00000611377 369 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL049767.1-202ENST00000637826 242 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL353796.1-201ENST00000561542 3241 ntBASIC5.5□□□□□ -1.53
HLA-DPA1P20036 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DPA1P20036 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 AC006484.1-201ENST00000435086 1884 ntBASIC5.49□□□□□ -1.53
HLA-DPA1P20036 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DPA1P20036 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms