Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL359513.1-201ENST00000614364 557 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AC005840.5-201ENST00000619166 599 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.68□□□□□ -1.5
PDGFRAP16234 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDGFRAP16234 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PDGFRAP16234 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFRAP16234 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.67□□□□□ -1.5
PDGFRAP16234 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFRAP16234 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFRAP16234 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFRAP16234 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFRAP16234 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFRAP16234 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PDGFRAP16234 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFRAP16234 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFRAP16234 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFRAP16234 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFRAP16234 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDGFRAP16234 RNU6-819P-201ENST00000364116 107 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFRAP16234 EI24P3-201ENST00000399046 1062 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 DHFRP5-201ENST00000406944 564 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFRAP16234 GTF3AP1-201ENST00000416942 1004 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AC009506.2-201ENST00000420635 840 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 ARAFP1-201ENST00000422172 605 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 SETP10-201ENST00000424368 814 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 RPS27AP6-201ENST00000427962 448 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 RPL5P2-201ENST00000429598 854 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFRAP16234 CFL1P1-202ENST00000432948 411 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 GSTM5P1-201ENST00000434751 660 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFRAP16234 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFRAP16234 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFRAP16234 TAAR4P-201ENST00000454843 1039 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFRAP16234 AC098583.1-201ENST00000480875 255 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 ATG10-AS1-201ENST00000504846 648 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 HMGB1P44-201ENST00000508597 572 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 SNORA48.9-201ENST00000516419 162 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFRAP16234 AP001804.2-201ENST00000533932 910 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AP004607.2-201ENST00000533949 322 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFRAP16234 AC009268.1-201ENST00000561352 1203 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFRAP16234 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFRAP16234 AC108738.1-201ENST00000603703 237 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AC090953.1-201ENST00000604305 1092 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AC000068.2-201ENST00000608816 460 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AL159169.2-201ENST00000610061 1269 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AL162574.1-201ENST00000615702 950 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFRAP16234 AC006840.1-201ENST00000623069 542 ntBASIC5.67□□□□□ -1.5
PDGFRAP16234 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFRAP16234 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFRAP16234 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFRAP16234 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFRAP16234 AC003985.2-201ENST00000562268 1669 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AL138820.1-201ENST00000617901 5305 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 SAMMSON-213ENST00000641336 1521 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 AL672167.2-201ENST00000377164 879 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AC005522.1-201ENST00000395416 346 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 DBIP1-201ENST00000401435 260 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AL607077.1-201ENST00000401718 499 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AL139039.2-201ENST00000407436 479 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 RNU6-564P-201ENST00000410983 104 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 GNG5P5-201ENST00000420444 220 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.66□□□□□ -1.5
PDGFRAP16234 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFRAP16234 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFRAP16234 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFRAP16234 SPRYD7P1-201ENST00000443861 570 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 RAB28P3-201ENST00000448325 597 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDGFRAP16234 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFRAP16234 AC022336.1-201ENST00000475510 337 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AC074386.1-201ENST00000476560 767 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 IGBP1P4-201ENST00000503202 879 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PDGFRAP16234 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFRAP16234 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFRAP16234 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.66□□□□□ -1.5
PDGFRAP16234 HMGN1P9-201ENST00000515212 298 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 BX510359.5-201ENST00000515651 304 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 SNORA70.17-201ENST00000516449 133 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms