Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH1P12830 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH1P12830 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AP000568.1-201ENST00000282964 442 ntBASIC5.34□□□□□ -1.55
CDH1P12830 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDH1P12830 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH1P12830 SDHDP6-201ENST00000414693 480 ntBASIC5.34□□□□□ -1.55
CDH1P12830 GTF3AP1-201ENST00000416942 1004 ntBASIC5.34□□□□□ -1.55
CDH1P12830 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC007161.1-204ENST00000423039 460 ntBASIC5.34□□□□□ -1.55
CDH1P12830 TNPO1P1-201ENST00000423641 1138 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH1P12830 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH1P12830 MTND4LP7-201ENST00000431728 294 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH1P12830 AL392003.1-201ENST00000434394 243 ntBASIC5.34□□□□□ -1.55
CDH1P12830 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH1P12830 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH1P12830 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH1P12830 GXYLT1P1-201ENST00000446657 490 ntBASIC5.34□□□□□ -1.55
CDH1P12830 IGBP1P3-201ENST00000447449 1000 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH1P12830 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH1P12830 LDHBP2-201ENST00000456969 1005 ntBASIC5.34□□□□□ -1.55
CDH1P12830 RNU7-157P-201ENST00000459600 66 ntBASIC5.34□□□□□ -1.55
CDH1P12830 PSAT1P4-201ENST00000466500 526 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC090589.1-201ENST00000473109 362 ntBASIC5.34□□□□□ -1.55
CDH1P12830 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH1P12830 UGT2A3P7-201ENST00000510485 734 ntBASIC5.34□□□□□ -1.55
CDH1P12830 RNU6-943P-201ENST00000516960 98 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH1P12830 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH1P12830 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH1P12830 LSM3P2-201ENST00000551246 273 ntBASIC5.34□□□□□ -1.55
CDH1P12830 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
CDH1P12830 AC093591.2-201ENST00000565254 3843 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH1P12830 VN1R81P-201ENST00000602085 372 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC011458.1-201ENST00000604034 617 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AL590410.1-201ENST00000617925 333 ntBASIC5.34□□□□□ -1.55
CDH1P12830 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH1P12830 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH1P12830 CU639417.4-201ENST00000623928 207 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC007683.2-201ENST00000624681 714 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AP001002.2-201ENST00000625137 386 ntBASIC5.34□□□□□ -1.55
CDH1P12830 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH1P12830 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDH1P12830 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH1P12830 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CDH1P12830 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDH1P12830 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH1P12830 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDH1P12830 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDH1P12830 RNU6-618P-201ENST00000363518 112 ntBASIC5.33□□□□□ -1.56
CDH1P12830 RN7SKP28-201ENST00000364770 305 ntBASIC5.33□□□□□ -1.56
CDH1P12830 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 MIR551A-201ENST00000385042 96 ntBASIC5.33□□□□□ -1.56
CDH1P12830 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH1P12830 CDY17P-201ENST00000414121 1282 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH1P12830 RIMKLBP2-201ENST00000424737 654 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AC104843.2-201ENST00000427666 297 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH1P12830 MRPS33P4-201ENST00000434892 317 ntBASIC5.33□□□□□ -1.56
CDH1P12830 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDH1P12830 AC019185.1-201ENST00000442718 389 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AP000281.1-201ENST00000444036 316 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH1P12830 AL161722.1-201ENST00000446972 1032 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH1P12830 AZGP1P2-201ENST00000454506 345 ntBASIC5.33□□□□□ -1.56
CDH1P12830 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH1P12830 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH1P12830 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH1P12830 AC025768.1-201ENST00000510057 267 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AC074087.1-201ENST00000512059 724 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH1P12830 AC117525.1-201ENST00000515228 503 ntBASIC5.33□□□□□ -1.56
CDH1P12830 NRBF2P4-201ENST00000520874 850 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH1P12830 AC079064.1-201ENST00000528365 362 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AC027544.3-201ENST00000535082 757 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.33□□□□□ -1.56
CDH1P12830 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH1P12830 AP005403.1-201ENST00000579720 229 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH1P12830 AC012616.1-201ENST00000600294 197 ntBASIC5.33□□□□□ -1.56
CDH1P12830 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH1P12830 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH1P12830 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH1P12830 RNA5SP440-201ENST00000612665 119 ntBASIC5.33□□□□□ -1.56
CDH1P12830 AL118522.2-201ENST00000616045 615 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms