Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.78□□□□□ -1.48
COL11A1P12107 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.78□□□□□ -1.48
COL11A1P12107 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.78□□□□□ -1.48
COL11A1P12107 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 AC093720.1-201ENST00000505681 714 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.78□□□□□ -1.48
COL11A1P12107 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.78□□□□□ -1.48
COL11A1P12107 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.78□□□□□ -1.48
COL11A1P12107 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.78□□□□□ -1.48
COL11A1P12107 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL11A1P12107 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.78□□□□□ -1.48
COL11A1P12107 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
COL11A1P12107 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 SAMMSON-226ENST00000642089 1582 ntBASIC5.77□□□□□ -1.49
COL11A1P12107 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.77□□□□□ -1.49
COL11A1P12107 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.77□□□□□ -1.49
COL11A1P12107 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.77□□□□□ -1.49
COL11A1P12107 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.77□□□□□ -1.49
COL11A1P12107 MTND2P40-201ENST00000436718 841 ntBASIC5.77□□□□□ -1.49
COL11A1P12107 CEACAMP9-201ENST00000442990 513 ntBASIC5.77□□□□□ -1.49
COL11A1P12107 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.77□□□□□ -1.49
COL11A1P12107 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.77□□□□□ -1.49
COL11A1P12107 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 EIF1P5-201ENST00000585002 234 ntBASIC5.77□□□□□ -1.49
COL11A1P12107 AL162431.4-201ENST00000604674 411 ntBASIC5.77□□□□□ -1.49
COL11A1P12107 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 uc_338.7-201ENST00000621834 124 ntBASIC5.77□□□□□ -1.49
COL11A1P12107 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.77□□□□□ -1.49
COL11A1P12107 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL11A1P12107 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.77□□□□□ -1.49
COL11A1P12107 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.77□□□□□ -1.49
COL11A1P12107 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL11A1P12107 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL11A1P12107 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
COL11A1P12107 SNORA70.6-201ENST00000383934 134 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 RN7SKP17-201ENST00000411242 351 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.76□□□□□ -1.49
COL11A1P12107 AC020779.1-201ENST00000478757 796 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 AP001880.2-201ENST00000538233 448 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 AC008033.2-201ENST00000542626 177 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 AC010435.1-201ENST00000623353 1177 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 AC007159.1-201ENST00000566529 4706 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL11A1P12107 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 SDAD1P1-202ENST00000524156 2051 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL11A1P12107 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL11A1P12107 AC063976.2-201ENST00000425667 3556 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL11A1P12107 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.76□□□□□ -1.49
COL11A1P12107 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.76□□□□□ -1.49
COL11A1P12107 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 RN7SL354P-201ENST00000469282 294 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL11A1P12107 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.76□□□□□ -1.49
COL11A1P12107 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.76□□□□□ -1.49
COL11A1P12107 AC079064.1-201ENST00000528365 362 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 AL512782.1-201ENST00000603093 364 ntBASIC5.76□□□□□ -1.49
COL11A1P12107 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.76□□□□□ -1.49
COL11A1P12107 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.76□□□□□ -1.49
COL11A1P12107 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL11A1P12107 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL11A1P12107 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.75□□□□□ -1.49
COL11A1P12107 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
COL11A1P12107 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COL11A1P12107 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms