Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5□□□□□ -1.61
MT-ND1P03886 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 MIR4675-201ENST00000577898 77 ntBASIC5□□□□□ -1.61
MT-ND1P03886 MIR4271-201ENST00000582451 67 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 AC138473.1-201ENST00000605717 526 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AL133406.3-201ENST00000606817 541 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 AC129915.3-201ENST00000634128 948 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5□□□□□ -1.61
MT-ND1P03886 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5□□□□□ -1.61
MT-ND1P03886 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5□□□□□ -1.61
MT-ND1P03886 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5□□□□□ -1.61
MT-ND1P03886 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
MT-ND1P03886 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
MT-ND1P03886 OR52B3P-201ENST00000314715 928 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 MIR365B-201ENST00000362317 111 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 RNU1-19P-201ENST00000363306 165 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 RNA5SP105-201ENST00000391123 113 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 HMGB3P7-201ENST00000400214 611 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 GAPDHP42-201ENST00000406848 981 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.99□□□□□ -1.61
MT-ND1P03886 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 AC124944.2-201ENST00000429866 1242 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.99□□□□□ -1.61
MT-ND1P03886 NOP56P2-201ENST00000447491 769 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 RAB28P3-201ENST00000448325 597 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 LRRC37A14P-201ENST00000452297 462 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AC007386.1-201ENST00000455212 582 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 AC105918.1-201ENST00000474399 838 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 RPL37P23-201ENST00000492641 294 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 AC147055.1-201ENST00000509261 750 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 RNU6-362P-201ENST00000516736 90 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.99□□□□□ -1.61
MT-ND1P03886 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.99□□□□□ -1.61
MT-ND1P03886 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AP006245.2-201ENST00000522004 300 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 AC024405.1-201ENST00000532521 1042 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 TOMM20P1-201ENST00000534518 427 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AC079600.1-201ENST00000550326 297 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AL138895.2-201ENST00000603019 178 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 Z95327.3-201ENST00000610385 572 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 AP003400.3-201ENST00000624904 346 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.99□□□□□ -1.61
MT-ND1P03886 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.99□□□□□ -1.61
MT-ND1P03886 MRRFP1-201ENST00000435941 1675 ntBASIC4.99□□□□□ -1.61
MT-ND1P03886 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.99□□□□□ -1.61
MT-ND1P03886 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MT-ND1P03886 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MT-ND1P03886 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MT-ND1P03886 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
MT-ND1P03886 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.98□□□□□ -1.61
MT-ND1P03886 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MT-ND1P03886 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
MT-ND1P03886 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
MT-ND1P03886 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
MT-ND1P03886 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
MT-ND1P03886 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
MT-ND1P03886 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.98□□□□□ -1.61
MT-ND1P03886 RNU1-146P-201ENST00000364015 165 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms