Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC020910.2-201ENST00000603635 610 ntBASIC6.05□□□□□ -1.44
COL2A1P02458 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.05□□□□□ -1.44
COL2A1P02458 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.05□□□□□ -1.44
COL2A1P02458 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.05□□□□□ -1.44
COL2A1P02458 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
COL2A1P02458 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.05□□□□□ -1.44
COL2A1P02458 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL2A1P02458 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
COL2A1P02458 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.04□□□□□ -1.44
COL2A1P02458 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.04□□□□□ -1.44
COL2A1P02458 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL2A1P02458 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.04□□□□□ -1.44
COL2A1P02458 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 SNORA70.2-201ENST00000364506 135 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL2A1P02458 NPM1P40-201ENST00000412758 733 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.04□□□□□ -1.44
COL2A1P02458 AC021876.1-201ENST00000425959 359 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.04□□□□□ -1.44
COL2A1P02458 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.04□□□□□ -1.44
COL2A1P02458 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 RPS29P9-201ENST00000440360 171 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 AC020779.1-201ENST00000478757 796 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 IGKV1-32-201ENST00000519290 311 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 MTND2P7-201ENST00000521337 640 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 AC136777.2-201ENST00000522979 358 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.04□□□□□ -1.44
COL2A1P02458 AC104687.2-201ENST00000604442 342 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.04□□□□□ -1.44
COL2A1P02458 MIR6758-201ENST00000620653 63 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 AC021422.1-201ENST00000621212 473 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.04□□□□□ -1.44
COL2A1P02458 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL2A1P02458 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL2A1P02458 AC104964.3-201ENST00000606115 2860 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL2A1P02458 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL2A1P02458 AC004076.2-201ENST00000620532 3323 ntBASIC6.04□□□□□ -1.44
COL2A1P02458 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL2A1P02458 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 SDAD1P1-202ENST00000524156 2051 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
COL2A1P02458 SNORA77-201ENST00000408716 125 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 AC019050.1-201ENST00000418508 492 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 AC007559.1-201ENST00000428736 355 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.03□□□□□ -1.44
COL2A1P02458 MED28P3-201ENST00000444288 531 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 RBMY2TP-201ENST00000451162 947 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 snoU13.20-201ENST00000459180 104 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.03□□□□□ -1.44
COL2A1P02458 GAPDHP56-201ENST00000506031 988 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 GCSHP4-201ENST00000538792 439 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 TOMM20P2-201ENST00000540082 421 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.03□□□□□ -1.44
COL2A1P02458 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.03□□□□□ -1.44
COL2A1P02458 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.03□□□□□ -1.44
COL2A1P02458 AC068790.7-201ENST00000602347 528 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 AC007786.3-201ENST00000615154 596 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.03□□□□□ -1.44
COL2A1P02458 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 AC138907.8-201ENST00000623981 2256 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 IRF5P1-201ENST00000504852 2164 ntBASIC6.03□□□□□ -1.44
COL2A1P02458 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
COL2A1P02458 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.03□□□□□ -1.44
COL2A1P02458 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL2A1P02458 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL2A1P02458 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
COL2A1P02458 Y_RNA.126-201ENST00000363382 111 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 Z97832.1-201ENST00000402490 328 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
COL2A1P02458 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.02□□□□□ -1.44
COL2A1P02458 AC138761.5-201ENST00000433967 325 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 AC008072.1-201ENST00000434254 824 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 AL359265.1-201ENST00000440296 795 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.02□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms