Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL022331.1-201ENST00000429025 477 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AC128677.1-201ENST00000436016 442 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AC239800.1-201ENST00000442049 719 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 RPS7P4-201ENST00000444127 582 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1BO75841 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1BO75841 AC004980.3-201ENST00000447046 365 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1BO75841 AL122020.1-201ENST00000472287 459 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 RN7SL441P-201ENST00000492388 296 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AL117692.1-201ENST00000494283 713 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AC097173.1-201ENST00000505862 819 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.42□□□□□ -1.7
UPK1BO75841 AC097460.2-201ENST00000511857 741 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1BO75841 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1BO75841 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1BO75841 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1BO75841 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.42□□□□□ -1.7
UPK1BO75841 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.42□□□□□ -1.7
UPK1BO75841 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.42□□□□□ -1.7
UPK1BO75841 AC005252.1-201ENST00000604518 1063 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AL008729.2-201ENST00000606393 473 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 Z93930.3-201ENST00000607919 749 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1BO75841 AC015819.1-201ENST00000613588 663 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1BO75841 KDM5DP1-201ENST00000622542 298 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.42□□□□□ -1.7
UPK1BO75841 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1BO75841 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1BO75841 AC217777.1-201ENST00000570034 1471 ntBASIC4.42□□□□□ -1.7
UPK1BO75841 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
UPK1BO75841 PANDAR-201ENST00000629595 1506 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
UPK1BO75841 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPK1BO75841 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.41□□□□□ -1.7
UPK1BO75841 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1BO75841 CASC19-238ENST00000641523 1558 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPK1BO75841 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
UPK1BO75841 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.41□□□□□ -1.7
UPK1BO75841 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1BO75841 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1BO75841 AC093414.1-201ENST00000434712 514 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1BO75841 AC069285.2-201ENST00000440210 275 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 BMS1P11-201ENST00000442351 885 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 AL353803.3-201ENST00000444641 335 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 TDGF1P1-201ENST00000445734 527 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1BO75841 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.41□□□□□ -1.7
UPK1BO75841 BMS1P9-201ENST00000457640 885 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 RPL5P30-201ENST00000465511 891 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPK1BO75841 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1BO75841 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.41□□□□□ -1.7
UPK1BO75841 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.41□□□□□ -1.7
UPK1BO75841 RNA5SP392-201ENST00000516905 112 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
UPK1BO75841 AC130366.1-201ENST00000526505 1192 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 EIF4EP5-201ENST00000528228 640 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 CYCSP28-201ENST00000534284 321 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 AL512310.9-201ENST00000553311 948 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.41□□□□□ -1.7
UPK1BO75841 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1BO75841 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.41□□□□□ -1.7
UPK1BO75841 SLC25A36P1-201ENST00000590111 465 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
UPK1BO75841 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1BO75841 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1BO75841 QTRT1P1-201ENST00000604344 1078 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 FAM27E4-201ENST00000605259 342 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 AL159169.2-201ENST00000610061 1269 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 MIR8080-201ENST00000622224 89 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1BO75841 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
UPK1BO75841 AC009950.2-201ENST00000636548 183 ntBASIC4.41□□□□□ -1.7
UPK1BO75841 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UPK1BO75841 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPK1BO75841 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPK1BO75841 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
UPK1BO75841 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.4□□□□□ -1.7
UPK1BO75841 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
UPK1BO75841 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
UPK1BO75841 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.4□□□□□ -1.7
UPK1BO75841 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
UPK1BO75841 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
UPK1BO75841 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
UPK1BO75841 AC226101.1-201ENST00000401483 387 ntBASIC4.4□□□□□ -1.71
UPK1BO75841 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.4□□□□□ -1.71
UPK1BO75841 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK1BO75841 VDAC1P9-201ENST00000412766 841 ntBASIC4.4□□□□□ -1.71
UPK1BO75841 MTND4LP21-201ENST00000415303 295 ntBASIC4.4□□□□□ -1.71
UPK1BO75841 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.4□□□□□ -1.71
UPK1BO75841 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK1BO75841 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.4□□□□□ -1.71
UPK1BO75841 ARMC4P1-201ENST00000438905 707 ntBASIC4.4□□□□□ -1.71
UPK1BO75841 AL450263.2-201ENST00000439400 589 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms